Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC21.46■■□□□ 1.03
NKX2-3Q8TAU0 AL096828.2-201ENST00000567259 1965 ntBASIC21.46■■□□□ 1.03
NKX2-3Q8TAU0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC21.46■■□□□ 1.03
NKX2-3Q8TAU0 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NKX2-3Q8TAU0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.46■■□□□ 1.03
NKX2-3Q8TAU0 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
NKX2-3Q8TAU0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NKX2-3Q8TAU0 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NKX2-3Q8TAU0 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NKX2-3Q8TAU0 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NKX2-3Q8TAU0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NKX2-3Q8TAU0 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
NKX2-3Q8TAU0 LINC00602-201ENST00000629776 2065 ntBASIC21.45■■□□□ 1.02
NKX2-3Q8TAU0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NKX2-3Q8TAU0 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NKX2-3Q8TAU0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NKX2-3Q8TAU0 AL590627.1-203ENST00000421194 1026 ntBASIC21.45■■□□□ 1.02
NKX2-3Q8TAU0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC21.45■■□□□ 1.02
NKX2-3Q8TAU0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC21.45■■□□□ 1.02
NKX2-3Q8TAU0 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
NKX2-3Q8TAU0 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC21.45■■□□□ 1.02
NKX2-3Q8TAU0 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.45■■□□□ 1.02
NKX2-3Q8TAU0 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.45■■□□□ 1.02
NKX2-3Q8TAU0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NKX2-3Q8TAU0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
NKX2-3Q8TAU0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.45■■□□□ 1.02
NKX2-3Q8TAU0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.45■■□□□ 1.02
NKX2-3Q8TAU0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
NKX2-3Q8TAU0 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.45■■□□□ 1.02
NKX2-3Q8TAU0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
NKX2-3Q8TAU0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.45■■□□□ 1.02
NKX2-3Q8TAU0 AC120498.9-201ENST00000339021 3867 ntBASIC21.45■■□□□ 1.02
NKX2-3Q8TAU0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
NKX2-3Q8TAU0 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.45■■□□□ 1.02
NKX2-3Q8TAU0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NKX2-3Q8TAU0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NKX2-3Q8TAU0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NKX2-3Q8TAU0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
NKX2-3Q8TAU0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.44■■□□□ 1.02
NKX2-3Q8TAU0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.44■■□□□ 1.02
NKX2-3Q8TAU0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NKX2-3Q8TAU0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
NKX2-3Q8TAU0 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
NKX2-3Q8TAU0 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NKX2-3Q8TAU0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.44■■□□□ 1.02
NKX2-3Q8TAU0 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NKX2-3Q8TAU0 TSPY22P-201ENST00000427496 604 ntBASIC21.44■■□□□ 1.02
NKX2-3Q8TAU0 LINC00265-3P-201ENST00000447588 903 ntBASIC21.44■■□□□ 1.02
NKX2-3Q8TAU0 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC21.44■■□□□ 1.02
NKX2-3Q8TAU0 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.44■■□□□ 1.02
NKX2-3Q8TAU0 TPSP2-201ENST00000561760 610 ntBASIC21.44■■□□□ 1.02
NKX2-3Q8TAU0 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC21.44■■□□□ 1.02
NKX2-3Q8TAU0 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.44■■□□□ 1.02
NKX2-3Q8TAU0 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NKX2-3Q8TAU0 HLA-A-201ENST00000376802 1334 ntBASIC21.44■■□□□ 1.02
NKX2-3Q8TAU0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NKX2-3Q8TAU0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
NKX2-3Q8TAU0 AC135050.7-201ENST00000624508 2218 ntBASIC21.44■■□□□ 1.02
NKX2-3Q8TAU0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NKX2-3Q8TAU0 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NKX2-3Q8TAU0 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.43■■□□□ 1.02
NKX2-3Q8TAU0 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.43■■□□□ 1.02
NKX2-3Q8TAU0 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
NKX2-3Q8TAU0 AL354751.1-201ENST00000412768 1863 ntBASIC21.43■■□□□ 1.02
NKX2-3Q8TAU0 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NKX2-3Q8TAU0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
NKX2-3Q8TAU0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NKX2-3Q8TAU0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.43■■□□□ 1.02
NKX2-3Q8TAU0 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
NKX2-3Q8TAU0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NKX2-3Q8TAU0 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
NKX2-3Q8TAU0 MRPL3P1-201ENST00000400109 1033 ntBASIC21.43■■□□□ 1.02
NKX2-3Q8TAU0 CIB2-208ENST00000560618 804 ntTSL 2 BASIC21.43■■□□□ 1.02
NKX2-3Q8TAU0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21.43■■□□□ 1.02
NKX2-3Q8TAU0 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
NKX2-3Q8TAU0 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NKX2-3Q8TAU0 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NKX2-3Q8TAU0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
NKX2-3Q8TAU0 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.43■■□□□ 1.02
NKX2-3Q8TAU0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
NKX2-3Q8TAU0 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NKX2-3Q8TAU0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
NKX2-3Q8TAU0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NKX2-3Q8TAU0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC21.43■■□□□ 1.02
NKX2-3Q8TAU0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NKX2-3Q8TAU0 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
NKX2-3Q8TAU0 REXO1L9P-201ENST00000604264 2108 ntBASIC21.43■■□□□ 1.02
NKX2-3Q8TAU0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
NKX2-3Q8TAU0 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NKX2-3Q8TAU0 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
NKX2-3Q8TAU0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.42■■□□□ 1.02
NKX2-3Q8TAU0 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
NKX2-3Q8TAU0 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
NKX2-3Q8TAU0 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.42■■□□□ 1.02
NKX2-3Q8TAU0 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NKX2-3Q8TAU0 ASL-204ENST00000395331 1538 ntTSL 5 BASIC21.42■■□□□ 1.02
NKX2-3Q8TAU0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
NKX2-3Q8TAU0 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
NKX2-3Q8TAU0 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC21.42■■□□□ 1.02
NKX2-3Q8TAU0 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms