Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.04■□□□□ 0.32
SMSP52788 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SMSP52788 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.04■□□□□ 0.32
SMSP52788 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMSP52788 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.04■□□□□ 0.32
SMSP52788 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMSP52788 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMSP52788 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMSP52788 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMSP52788 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
SMSP52788 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.03■□□□□ 0.32
SMSP52788 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMSP52788 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMSP52788 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMSP52788 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMSP52788 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SMSP52788 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMSP52788 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.03■□□□□ 0.32
SMSP52788 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.03■□□□□ 0.32
SMSP52788 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.03■□□□□ 0.32
SMSP52788 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.03■□□□□ 0.32
SMSP52788 AL136038.3-201ENST00000561909 1096 ntBASIC17.03■□□□□ 0.32
SMSP52788 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.03■□□□□ 0.32
SMSP52788 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMSP52788 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.03■□□□□ 0.32
SMSP52788 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMSP52788 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMSP52788 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMSP52788 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SMSP52788 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMSP52788 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
SMSP52788 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.03■□□□□ 0.32
SMSP52788 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.03■□□□□ 0.32
SMSP52788 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMSP52788 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMSP52788 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SMSP52788 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMSP52788 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMSP52788 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMSP52788 AC020916.1-201ENST00000587762 1774 ntBASIC17.02■□□□□ 0.32
SMSP52788 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMSP52788 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMSP52788 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SMSP52788 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SMSP52788 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.02■□□□□ 0.32
SMSP52788 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.02■□□□□ 0.32
SMSP52788 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SMSP52788 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
SMSP52788 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SMSP52788 AC026396.1-201ENST00000419388 421 ntBASIC17.02■□□□□ 0.32
SMSP52788 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.02■□□□□ 0.32
SMSP52788 DUSP5P1-201ENST00000441325 1139 ntBASIC17.02■□□□□ 0.32
SMSP52788 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SMSP52788 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SMSP52788 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.02■□□□□ 0.32
SMSP52788 NEK4P2-201ENST00000580004 1012 ntBASIC17.02■□□□□ 0.32
SMSP52788 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.02■□□□□ 0.32
SMSP52788 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.02■□□□□ 0.32
SMSP52788 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SMSP52788 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SMSP52788 AC067852.2-201ENST00000590513 2313 ntBASIC17.02■□□□□ 0.31
SMSP52788 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SMSP52788 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SMSP52788 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SMSP52788 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.02■□□□□ 0.31
SMSP52788 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMSP52788 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMSP52788 AC008764.6-201ENST00000595909 2069 ntBASIC17.01■□□□□ 0.31
SMSP52788 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMSP52788 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMSP52788 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.01■□□□□ 0.31
SMSP52788 MTMR9LP-203ENST00000426597 1545 ntBASIC17.01■□□□□ 0.31
SMSP52788 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SMSP52788 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMSP52788 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.01■□□□□ 0.31
SMSP52788 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMSP52788 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMSP52788 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMSP52788 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SMSP52788 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMSP52788 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.01■□□□□ 0.31
SMSP52788 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMSP52788 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMSP52788 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.01■□□□□ 0.31
SMSP52788 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMSP52788 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.01■□□□□ 0.31
SMSP52788 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMSP52788 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMSP52788 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMSP52788 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.01■□□□□ 0.31
SMSP52788 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMSP52788 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.01■□□□□ 0.31
SMSP52788 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.01■□□□□ 0.31
SMSP52788 AC068587.9-201ENST00000641814 219 ntBASIC17.01■□□□□ 0.31
SMSP52788 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.01■□□□□ 0.31
SMSP52788 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMSP52788 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMSP52788 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.01■□□□□ 0.31
SMSP52788 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.01■□□□□ 0.31
SMSP52788 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms