Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PPP3CBP16298 SEC1P-202ENST00000473944 940 ntBASIC16.3■□□□□ 0.2
PPP3CBP16298 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.3■□□□□ 0.2
PPP3CBP16298 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.3■□□□□ 0.2
PPP3CBP16298 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.3■□□□□ 0.2
PPP3CBP16298 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PPP3CBP16298 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PPP3CBP16298 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.3■□□□□ 0.2
PPP3CBP16298 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PPP3CBP16298 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PPP3CBP16298 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.3■□□□□ 0.2
PPP3CBP16298 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PPP3CBP16298 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PPP3CBP16298 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPP3CBP16298 KRT8P32-201ENST00000512863 1461 ntBASIC16.29■□□□□ 0.2
PPP3CBP16298 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPP3CBP16298 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PPP3CBP16298 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PPP3CBP16298 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPP3CBP16298 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPP3CBP16298 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPP3CBP16298 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPP3CBP16298 AC141586.3-201ENST00000562166 1838 ntBASIC16.29■□□□□ 0.2
PPP3CBP16298 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
PPP3CBP16298 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPP3CBP16298 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.29■□□□□ 0.2
PPP3CBP16298 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPP3CBP16298 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.29■□□□□ 0.2
PPP3CBP16298 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPP3CBP16298 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PPP3CBP16298 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PPP3CBP16298 AL645929.1-201ENST00000420084 975 ntBASIC16.29■□□□□ 0.2
PPP3CBP16298 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PPP3CBP16298 KRT18P23-201ENST00000435622 1283 ntBASIC16.29■□□□□ 0.2
PPP3CBP16298 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PPP3CBP16298 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.29■□□□□ 0.2
PPP3CBP16298 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
PPP3CBP16298 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.29■□□□□ 0.2
PPP3CBP16298 MIR3917-201ENST00000580971 93 ntBASIC16.29■□□□□ 0.2
PPP3CBP16298 MIR3180-4-201ENST00000582223 153 ntBASIC16.29■□□□□ 0.2
PPP3CBP16298 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.29■□□□□ 0.2
PPP3CBP16298 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
PPP3CBP16298 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPP3CBP16298 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PPP3CBP16298 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.29■□□□□ 0.2
PPP3CBP16298 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPP3CBP16298 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
PPP3CBP16298 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PPP3CBP16298 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPP3CBP16298 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPP3CBP16298 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPP3CBP16298 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPP3CBP16298 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
PPP3CBP16298 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PPP3CBP16298 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
PPP3CBP16298 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.28■□□□□ 0.2
PPP3CBP16298 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPP3CBP16298 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPP3CBP16298 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PPP3CBP16298 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.28■□□□□ 0.2
PPP3CBP16298 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPP3CBP16298 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPP3CBP16298 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.28■□□□□ 0.2
PPP3CBP16298 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPP3CBP16298 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.28■□□□□ 0.2
PPP3CBP16298 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPP3CBP16298 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPP3CBP16298 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPP3CBP16298 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPP3CBP16298 MIR564-202ENST00000385049 94 ntBASIC16.28■□□□□ 0.2
PPP3CBP16298 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.28■□□□□ 0.2
PPP3CBP16298 AC093458.2-201ENST00000623150 629 ntBASIC16.28■□□□□ 0.2
PPP3CBP16298 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.28■□□□□ 0.2
PPP3CBP16298 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPP3CBP16298 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PPP3CBP16298 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PPP3CBP16298 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PPP3CBP16298 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PPP3CBP16298 IRX1P1-201ENST00000438849 1838 ntBASIC16.28■□□□□ 0.2
PPP3CBP16298 AC106820.2-201ENST00000563775 3264 ntBASIC16.28■□□□□ 0.2
PPP3CBP16298 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.28■□□□□ 0.2
PPP3CBP16298 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.28■□□□□ 0.2
PPP3CBP16298 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPP3CBP16298 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.28■□□□□ 0.2
PPP3CBP16298 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPP3CBP16298 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPP3CBP16298 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PPP3CBP16298 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.27■□□□□ 0.2
PPP3CBP16298 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.27■□□□□ 0.2
PPP3CBP16298 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PPP3CBP16298 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.27■□□□□ 0.2
PPP3CBP16298 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PPP3CBP16298 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PPP3CBP16298 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PPP3CBP16298 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PPP3CBP16298 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.27■□□□□ 0.2
PPP3CBP16298 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.27■□□□□ 0.2
PPP3CBP16298 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.27■□□□□ 0.2
PPP3CBP16298 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PPP3CBP16298 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms