Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UPK1BO75841 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UPK1BO75841 MOK-233ENST00000524214 1539 ntTSL 2 BASIC15.84■□□□□ 0.13
UPK1BO75841 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UPK1BO75841 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
UPK1BO75841 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.84■□□□□ 0.13
UPK1BO75841 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
UPK1BO75841 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UPK1BO75841 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.84■□□□□ 0.13
UPK1BO75841 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.84■□□□□ 0.13
UPK1BO75841 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UPK1BO75841 AC105917.1-201ENST00000506637 2539 ntBASIC15.84■□□□□ 0.13
UPK1BO75841 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.84■□□□□ 0.13
UPK1BO75841 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UPK1BO75841 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UPK1BO75841 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
UPK1BO75841 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UPK1BO75841 AL136162.1-201ENST00000607711 1078 ntBASIC15.84■□□□□ 0.13
UPK1BO75841 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UPK1BO75841 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
UPK1BO75841 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UPK1BO75841 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UPK1BO75841 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.84■□□□□ 0.13
UPK1BO75841 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UPK1BO75841 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UPK1BO75841 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UPK1BO75841 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UPK1BO75841 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UPK1BO75841 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
UPK1BO75841 AC006449.5-201ENST00000610658 2098 ntBASIC15.83■□□□□ 0.13
UPK1BO75841 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.83■□□□□ 0.13
UPK1BO75841 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
UPK1BO75841 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
UPK1BO75841 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UPK1BO75841 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
UPK1BO75841 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UPK1BO75841 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UPK1BO75841 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UPK1BO75841 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
UPK1BO75841 EBPL-204ENST00000378272 766 ntTSL 3 BASIC15.83■□□□□ 0.12
UPK1BO75841 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UPK1BO75841 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
UPK1BO75841 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UPK1BO75841 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
UPK1BO75841 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UPK1BO75841 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC15.83■□□□□ 0.12
UPK1BO75841 AC135279.3-201ENST00000610945 1311 ntBASIC15.83■□□□□ 0.12
UPK1BO75841 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
UPK1BO75841 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UPK1BO75841 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
UPK1BO75841 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UPK1BO75841 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC15.83■□□□□ 0.12
UPK1BO75841 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
UPK1BO75841 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
UPK1BO75841 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UPK1BO75841 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UPK1BO75841 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
UPK1BO75841 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UPK1BO75841 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UPK1BO75841 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.83■□□□□ 0.12
UPK1BO75841 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
UPK1BO75841 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.83■□□□□ 0.12
UPK1BO75841 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UPK1BO75841 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
UPK1BO75841 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UPK1BO75841 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UPK1BO75841 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
UPK1BO75841 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UPK1BO75841 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
UPK1BO75841 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UPK1BO75841 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
UPK1BO75841 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UPK1BO75841 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UPK1BO75841 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
UPK1BO75841 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UPK1BO75841 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UPK1BO75841 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
UPK1BO75841 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
UPK1BO75841 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
UPK1BO75841 TERF1P5-201ENST00000477545 1207 ntBASIC15.82■□□□□ 0.12
UPK1BO75841 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UPK1BO75841 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC15.82■□□□□ 0.12
UPK1BO75841 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC15.82■□□□□ 0.12
UPK1BO75841 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC15.82■□□□□ 0.12
UPK1BO75841 TFG-210ENST00000620299 1289 ntTSL 5 BASIC15.82■□□□□ 0.12
UPK1BO75841 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC15.82■□□□□ 0.12
UPK1BO75841 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UPK1BO75841 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
UPK1BO75841 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC15.82■□□□□ 0.12
UPK1BO75841 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UPK1BO75841 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.82■□□□□ 0.12
UPK1BO75841 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
UPK1BO75841 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UPK1BO75841 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UPK1BO75841 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
UPK1BO75841 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.82■□□□□ 0.12
UPK1BO75841 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.82■□□□□ 0.12
UPK1BO75841 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
UPK1BO75841 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UPK1BO75841 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms