Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA4O00483 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA4O00483 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA4O00483 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC13.95□□□□□ -0.18
NDUFA4O00483 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA4O00483 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA4O00483 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
NDUFA4O00483 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA4O00483 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC13.94□□□□□ -0.18
NDUFA4O00483 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA4O00483 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA4O00483 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
NDUFA4O00483 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA4O00483 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA4O00483 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
NDUFA4O00483 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA4O00483 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA4O00483 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA4O00483 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA4O00483 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA4O00483 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA4O00483 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA4O00483 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA4O00483 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC13.94□□□□□ -0.18
NDUFA4O00483 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA4O00483 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC13.94□□□□□ -0.18
NDUFA4O00483 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC13.94□□□□□ -0.18
NDUFA4O00483 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC13.94□□□□□ -0.18
NDUFA4O00483 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA4O00483 LINC01238-205ENST00000567549 1107 ntBASIC13.94□□□□□ -0.18
NDUFA4O00483 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA4O00483 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC13.94□□□□□ -0.18
NDUFA4O00483 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA4O00483 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA4O00483 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC13.94□□□□□ -0.18
NDUFA4O00483 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA4O00483 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC13.94□□□□□ -0.18
NDUFA4O00483 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA4O00483 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA4O00483 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA4O00483 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
NDUFA4O00483 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA4O00483 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA4O00483 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
NDUFA4O00483 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
NDUFA4O00483 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA4O00483 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC13.93□□□□□ -0.18
NDUFA4O00483 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA4O00483 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA4O00483 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA4O00483 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA4O00483 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NDUFA4O00483 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
NDUFA4O00483 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA4O00483 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
NDUFA4O00483 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA4O00483 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA4O00483 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
NDUFA4O00483 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
NDUFA4O00483 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA4O00483 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA4O00483 SPDYE15P-201ENST00000424157 909 ntBASIC13.93□□□□□ -0.18
NDUFA4O00483 HLA-F-220ENST00000434407 884 ntBASIC13.93□□□□□ -0.18
NDUFA4O00483 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA4O00483 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC13.93□□□□□ -0.18
NDUFA4O00483 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA4O00483 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC13.93□□□□□ -0.18
NDUFA4O00483 SNX5-210ENST00000481323 562 ntTSL 3 BASIC13.93□□□□□ -0.18
NDUFA4O00483 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC13.93□□□□□ -0.18
NDUFA4O00483 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC13.93□□□□□ -0.18
NDUFA4O00483 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC13.93□□□□□ -0.18
NDUFA4O00483 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA4O00483 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC13.93□□□□□ -0.18
NDUFA4O00483 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC13.93□□□□□ -0.18
NDUFA4O00483 AC006011.2-201ENST00000621313 1158 ntBASIC13.93□□□□□ -0.18
NDUFA4O00483 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA4O00483 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC13.93□□□□□ -0.18
NDUFA4O00483 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
NDUFA4O00483 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA4O00483 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA4O00483 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA4O00483 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA4O00483 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA4O00483 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
NDUFA4O00483 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA4O00483 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA4O00483 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA4O00483 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA4O00483 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA4O00483 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NDUFA4O00483 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC13.92□□□□□ -0.18
NDUFA4O00483 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
NDUFA4O00483 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NDUFA4O00483 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NDUFA4O00483 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NDUFA4O00483 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NDUFA4O00483 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NDUFA4O00483 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NDUFA4O00483 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC13.92□□□□□ -0.18
NDUFA4O00483 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms