Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CHKB-CPT1BH3BT56 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
CHKB-CPT1BH3BT56 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CHKB-CPT1BH3BT56 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CHKB-CPT1BH3BT56 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CHKB-CPT1BH3BT56 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
CHKB-CPT1BH3BT56 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CHKB-CPT1BH3BT56 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
CHKB-CPT1BH3BT56 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CHKB-CPT1BH3BT56 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 AC009237.14-201ENST00000609975 1594 ntBASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 AL031598.1-201ENST00000561511 1773 ntBASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 TBCD-201ENST00000355528 7168 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 MIR2861-201ENST00000636310 90 ntBASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
CHKB-CPT1BH3BT56 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 TP73-201ENST00000346387 4854 ntTSL 5 BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 CMC2-201ENST00000219400 10301 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC10.08□□□□□ -0.8
CHKB-CPT1BH3BT56 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CHKB-CPT1BH3BT56 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms