Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.91■□□□□ 0.3
POLE3Q9NRF9 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
POLE3Q9NRF9 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLE3Q9NRF9 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLE3Q9NRF9 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
POLE3Q9NRF9 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLE3Q9NRF9 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
POLE3Q9NRF9 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLE3Q9NRF9 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLE3Q9NRF9 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLE3Q9NRF9 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLE3Q9NRF9 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLE3Q9NRF9 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLE3Q9NRF9 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLE3Q9NRF9 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
POLE3Q9NRF9 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.9■□□□□ 0.3
POLE3Q9NRF9 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.9■□□□□ 0.3
POLE3Q9NRF9 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.9■□□□□ 0.3
POLE3Q9NRF9 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLE3Q9NRF9 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLE3Q9NRF9 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.9■□□□□ 0.3
POLE3Q9NRF9 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.9■□□□□ 0.3
POLE3Q9NRF9 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.9■□□□□ 0.3
POLE3Q9NRF9 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
POLE3Q9NRF9 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
POLE3Q9NRF9 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.9■□□□□ 0.3
POLE3Q9NRF9 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
POLE3Q9NRF9 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLE3Q9NRF9 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.9■□□□□ 0.3
POLE3Q9NRF9 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
POLE3Q9NRF9 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
POLE3Q9NRF9 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLE3Q9NRF9 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.9■□□□□ 0.3
POLE3Q9NRF9 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.9■□□□□ 0.3
POLE3Q9NRF9 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
POLE3Q9NRF9 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.9■□□□□ 0.3
POLE3Q9NRF9 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLE3Q9NRF9 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLE3Q9NRF9 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLE3Q9NRF9 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
POLE3Q9NRF9 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.89■□□□□ 0.3
POLE3Q9NRF9 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.89■□□□□ 0.3
POLE3Q9NRF9 AL096828.2-201ENST00000567259 1965 ntBASIC16.89■□□□□ 0.3
POLE3Q9NRF9 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
POLE3Q9NRF9 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
POLE3Q9NRF9 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.89■□□□□ 0.3
POLE3Q9NRF9 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 AC087499.1-201ENST00000418141 1075 ntBASIC16.89■□□□□ 0.29
POLE3Q9NRF9 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 MIR3917-201ENST00000580971 93 ntBASIC16.89■□□□□ 0.29
POLE3Q9NRF9 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 AC024243.1-201ENST00000609234 778 ntBASIC16.89■□□□□ 0.29
POLE3Q9NRF9 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLE3Q9NRF9 AC093010.1-201ENST00000473625 1624 ntBASIC16.88■□□□□ 0.29
POLE3Q9NRF9 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
POLE3Q9NRF9 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.88■□□□□ 0.29
POLE3Q9NRF9 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
POLE3Q9NRF9 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.88■□□□□ 0.29
POLE3Q9NRF9 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
POLE3Q9NRF9 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms