Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.03■□□□□ 0.64
SMOQ99835 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.03■□□□□ 0.64
SMOQ99835 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.03■□□□□ 0.64
SMOQ99835 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.03■□□□□ 0.64
SMOQ99835 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMOQ99835 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMOQ99835 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.03■□□□□ 0.64
SMOQ99835 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMOQ99835 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMOQ99835 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.03■□□□□ 0.64
SMOQ99835 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMOQ99835 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMOQ99835 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMOQ99835 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.03■□□□□ 0.64
SMOQ99835 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
SMOQ99835 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.03■□□□□ 0.64
SMOQ99835 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
SMOQ99835 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMOQ99835 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.02■□□□□ 0.64
SMOQ99835 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.02■□□□□ 0.64
SMOQ99835 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.02■□□□□ 0.64
SMOQ99835 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMOQ99835 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
SMOQ99835 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
SMOQ99835 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.02■□□□□ 0.64
SMOQ99835 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
SMOQ99835 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMOQ99835 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMOQ99835 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
SMOQ99835 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMOQ99835 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.02■□□□□ 0.64
SMOQ99835 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.02■□□□□ 0.64
SMOQ99835 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMOQ99835 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMOQ99835 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMOQ99835 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMOQ99835 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SMOQ99835 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SMOQ99835 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMOQ99835 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.02■□□□□ 0.64
SMOQ99835 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.02■□□□□ 0.64
SMOQ99835 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.02■□□□□ 0.64
SMOQ99835 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMOQ99835 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.02■□□□□ 0.64
SMOQ99835 AC011840.4-201ENST00000578471 627 ntBASIC19.02■□□□□ 0.64
SMOQ99835 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SMOQ99835 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.02■□□□□ 0.64
SMOQ99835 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMOQ99835 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMOQ99835 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMOQ99835 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMOQ99835 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
SMOQ99835 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
SMOQ99835 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SMOQ99835 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.01■□□□□ 0.63
SMOQ99835 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SMOQ99835 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SMOQ99835 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SMOQ99835 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SMOQ99835 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMOQ99835 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMOQ99835 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMOQ99835 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMOQ99835 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.01■□□□□ 0.63
SMOQ99835 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SMOQ99835 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.01■□□□□ 0.63
SMOQ99835 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.01■□□□□ 0.63
SMOQ99835 IGHV3-47-201ENST00000425060 335 ntBASIC19.01■□□□□ 0.63
SMOQ99835 KRT17P6-201ENST00000453795 1220 ntBASIC19.01■□□□□ 0.63
SMOQ99835 AC012615.1-201ENST00000565797 1299 ntBASIC19.01■□□□□ 0.63
SMOQ99835 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.01■□□□□ 0.63
SMOQ99835 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
SMOQ99835 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SMOQ99835 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.01■□□□□ 0.63
SMOQ99835 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.01■□□□□ 0.63
SMOQ99835 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMOQ99835 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMOQ99835 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMOQ99835 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SMOQ99835 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMOQ99835 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.01■□□□□ 0.63
SMOQ99835 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMOQ99835 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19■□□□□ 0.63
SMOQ99835 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMOQ99835 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
SMOQ99835 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMOQ99835 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMOQ99835 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19■□□□□ 0.63
SMOQ99835 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SMOQ99835 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMOQ99835 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SMOQ99835 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19■□□□□ 0.63
SMOQ99835 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SMOQ99835 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMOQ99835 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMOQ99835 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMOQ99835 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMOQ99835 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19■□□□□ 0.63
SMOQ99835 AC246785.2-201ENST00000432512 513 ntBASIC19■□□□□ 0.63
SMOQ99835 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms