Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TWNKQ96RR1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.27■□□□□ 0.68
TWNKQ96RR1 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TWNKQ96RR1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TWNKQ96RR1 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TWNKQ96RR1 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TWNKQ96RR1 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TWNKQ96RR1 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
TWNKQ96RR1 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.27■□□□□ 0.68
TWNKQ96RR1 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.27■□□□□ 0.68
TWNKQ96RR1 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.27■□□□□ 0.68
TWNKQ96RR1 KRT8P26-201ENST00000534154 1276 ntBASIC19.27■□□□□ 0.68
TWNKQ96RR1 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TWNKQ96RR1 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TWNKQ96RR1 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.27■□□□□ 0.68
TWNKQ96RR1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TWNKQ96RR1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TWNKQ96RR1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
TWNKQ96RR1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TWNKQ96RR1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TWNKQ96RR1 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.27■□□□□ 0.67
TWNKQ96RR1 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TWNKQ96RR1 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TWNKQ96RR1 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TWNKQ96RR1 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TWNKQ96RR1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TWNKQ96RR1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TWNKQ96RR1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TWNKQ96RR1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
TWNKQ96RR1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.26■□□□□ 0.67
TWNKQ96RR1 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TWNKQ96RR1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TWNKQ96RR1 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TWNKQ96RR1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TWNKQ96RR1 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TWNKQ96RR1 AP002383.4-201ENST00000442518 975 ntBASIC19.26■□□□□ 0.67
TWNKQ96RR1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.26■□□□□ 0.67
TWNKQ96RR1 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.26■□□□□ 0.67
TWNKQ96RR1 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TWNKQ96RR1 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.26■□□□□ 0.67
TWNKQ96RR1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TWNKQ96RR1 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TWNKQ96RR1 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.26■□□□□ 0.67
TWNKQ96RR1 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.26■□□□□ 0.67
TWNKQ96RR1 AL390961.4-201ENST00000623958 2535 ntBASIC19.26■□□□□ 0.67
TWNKQ96RR1 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TWNKQ96RR1 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TWNKQ96RR1 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TWNKQ96RR1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TWNKQ96RR1 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TWNKQ96RR1 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TWNKQ96RR1 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TWNKQ96RR1 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TWNKQ96RR1 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.25■□□□□ 0.67
TWNKQ96RR1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TWNKQ96RR1 AP000997.3-201ENST00000623333 2250 ntBASIC19.25■□□□□ 0.67
TWNKQ96RR1 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TWNKQ96RR1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.25■□□□□ 0.67
TWNKQ96RR1 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TWNKQ96RR1 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TWNKQ96RR1 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TWNKQ96RR1 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.25■□□□□ 0.67
TWNKQ96RR1 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.25■□□□□ 0.67
TWNKQ96RR1 UPK3BP1-201ENST00000428678 509 ntBASIC19.25■□□□□ 0.67
TWNKQ96RR1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TWNKQ96RR1 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.25■□□□□ 0.67
TWNKQ96RR1 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.25■□□□□ 0.67
TWNKQ96RR1 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.25■□□□□ 0.67
TWNKQ96RR1 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TWNKQ96RR1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TWNKQ96RR1 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TWNKQ96RR1 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.25■□□□□ 0.67
TWNKQ96RR1 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TWNKQ96RR1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TWNKQ96RR1 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TWNKQ96RR1 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.25■□□□□ 0.67
TWNKQ96RR1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TWNKQ96RR1 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TWNKQ96RR1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.24■□□□□ 0.67
TWNKQ96RR1 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TWNKQ96RR1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TWNKQ96RR1 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TWNKQ96RR1 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TWNKQ96RR1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
TWNKQ96RR1 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TWNKQ96RR1 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.24■□□□□ 0.67
TWNKQ96RR1 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TWNKQ96RR1 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TWNKQ96RR1 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
TWNKQ96RR1 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.24■□□□□ 0.67
TWNKQ96RR1 BX276092.5-203ENST00000456199 560 ntBASIC19.24■□□□□ 0.67
TWNKQ96RR1 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
TWNKQ96RR1 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TWNKQ96RR1 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.24■□□□□ 0.67
TWNKQ96RR1 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
TWNKQ96RR1 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.24■□□□□ 0.67
TWNKQ96RR1 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.24■□□□□ 0.67
TWNKQ96RR1 AL121672.3-201ENST00000608644 468 ntBASIC19.24■□□□□ 0.67
TWNKQ96RR1 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TWNKQ96RR1 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms