Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.36■□□□□ 0.37
SRFBP1Q8NEF9 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRFBP1Q8NEF9 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRFBP1Q8NEF9 AC104076.2-201ENST00000448912 469 ntBASIC17.36■□□□□ 0.37
SRFBP1Q8NEF9 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.36■□□□□ 0.37
SRFBP1Q8NEF9 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRFBP1Q8NEF9 RN7SL850P-201ENST00000579959 291 ntBASIC17.36■□□□□ 0.37
SRFBP1Q8NEF9 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.36■□□□□ 0.37
SRFBP1Q8NEF9 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRFBP1Q8NEF9 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SRFBP1Q8NEF9 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SRFBP1Q8NEF9 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRFBP1Q8NEF9 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRFBP1Q8NEF9 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRFBP1Q8NEF9 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SRFBP1Q8NEF9 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRFBP1Q8NEF9 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 AL391807.1-203ENST00000604392 2365 ntBASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 AC063952.2-201ENST00000498792 1227 ntBASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 AC024563.2-201ENST00000603282 481 ntBASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 PHGDH-209ENST00000641074 1780 ntBASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRFBP1Q8NEF9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SRFBP1Q8NEF9 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SRFBP1Q8NEF9 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRFBP1Q8NEF9 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRFBP1Q8NEF9 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRFBP1Q8NEF9 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRFBP1Q8NEF9 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRFBP1Q8NEF9 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRFBP1Q8NEF9 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRFBP1Q8NEF9 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.34■□□□□ 0.37
SRFBP1Q8NEF9 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SRFBP1Q8NEF9 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SRFBP1Q8NEF9 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRFBP1Q8NEF9 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SRFBP1Q8NEF9 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SRFBP1Q8NEF9 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRFBP1Q8NEF9 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRFBP1Q8NEF9 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRFBP1Q8NEF9 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.34■□□□□ 0.37
SRFBP1Q8NEF9 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.34■□□□□ 0.37
SRFBP1Q8NEF9 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SRFBP1Q8NEF9 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRFBP1Q8NEF9 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SRFBP1Q8NEF9 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.34■□□□□ 0.37
SRFBP1Q8NEF9 AC113404.2-201ENST00000507884 177 ntBASIC17.34■□□□□ 0.37
SRFBP1Q8NEF9 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.34■□□□□ 0.37
SRFBP1Q8NEF9 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRFBP1Q8NEF9 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SRFBP1Q8NEF9 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.34■□□□□ 0.37
SRFBP1Q8NEF9 LINC01126-201ENST00000623515 1646 ntBASIC17.34■□□□□ 0.37
SRFBP1Q8NEF9 AL390961.4-201ENST00000623958 2535 ntBASIC17.34■□□□□ 0.37
SRFBP1Q8NEF9 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SRFBP1Q8NEF9 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRFBP1Q8NEF9 AC099343.3-201ENST00000605834 2503 ntBASIC17.34■□□□□ 0.37
SRFBP1Q8NEF9 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SRFBP1Q8NEF9 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
SRFBP1Q8NEF9 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SRFBP1Q8NEF9 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SRFBP1Q8NEF9 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SRFBP1Q8NEF9 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SRFBP1Q8NEF9 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
SRFBP1Q8NEF9 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SRFBP1Q8NEF9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SRFBP1Q8NEF9 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms