Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC22.05■■□□□ 1.12
SLX4Q8IY92 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SLX4Q8IY92 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
SLX4Q8IY92 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
SLX4Q8IY92 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC22.05■■□□□ 1.12
SLX4Q8IY92 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC22.05■■□□□ 1.12
SLX4Q8IY92 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC22.05■■□□□ 1.12
SLX4Q8IY92 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC22.05■■□□□ 1.12
SLX4Q8IY92 PGM5P2-202ENST00000637225 1043 ntBASIC22.05■■□□□ 1.12
SLX4Q8IY92 AL022326.1-202ENST00000641533 845 ntBASIC22.05■■□□□ 1.12
SLX4Q8IY92 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC22.05■■□□□ 1.12
SLX4Q8IY92 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC22.05■■□□□ 1.12
SLX4Q8IY92 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC22.05■■□□□ 1.12
SLX4Q8IY92 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC22.05■■□□□ 1.12
SLX4Q8IY92 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC22.05■■□□□ 1.12
SLX4Q8IY92 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SLX4Q8IY92 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
SLX4Q8IY92 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC22.04■■□□□ 1.12
SLX4Q8IY92 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC22.04■■□□□ 1.12
SLX4Q8IY92 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC22.04■■□□□ 1.12
SLX4Q8IY92 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLX4Q8IY92 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SLX4Q8IY92 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLX4Q8IY92 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC22.04■■□□□ 1.12
SLX4Q8IY92 MIR3197-201ENST00000582241 73 ntBASIC22.04■■□□□ 1.12
SLX4Q8IY92 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
SLX4Q8IY92 AD001527.2-201ENST00000622994 785 ntBASIC22.04■■□□□ 1.12
SLX4Q8IY92 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLX4Q8IY92 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
SLX4Q8IY92 KRT8P47-201ENST00000604727 1398 ntBASIC22.04■■□□□ 1.12
SLX4Q8IY92 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLX4Q8IY92 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SLX4Q8IY92 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC22.04■■□□□ 1.12
SLX4Q8IY92 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SLX4Q8IY92 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLX4Q8IY92 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC22.04■■□□□ 1.12
SLX4Q8IY92 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SLX4Q8IY92 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLX4Q8IY92 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SLX4Q8IY92 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SLX4Q8IY92 PON3-203ENST00000427422 894 ntTSL 3 BASIC22.03■■□□□ 1.12
SLX4Q8IY92 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC22.03■■□□□ 1.12
SLX4Q8IY92 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SLX4Q8IY92 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC22.03■■□□□ 1.12
SLX4Q8IY92 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SLX4Q8IY92 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SLX4Q8IY92 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.03■■□□□ 1.12
SLX4Q8IY92 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC22.03■■□□□ 1.12
SLX4Q8IY92 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC22.03■■□□□ 1.12
SLX4Q8IY92 AC096633.1-201ENST00000422446 749 ntBASIC22.03■■□□□ 1.12
SLX4Q8IY92 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC22.03■■□□□ 1.12
SLX4Q8IY92 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC22.03■■□□□ 1.12
SLX4Q8IY92 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC22.03■■□□□ 1.12
SLX4Q8IY92 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC22.03■■□□□ 1.12
SLX4Q8IY92 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SLX4Q8IY92 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC22.03■■□□□ 1.12
SLX4Q8IY92 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SLX4Q8IY92 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
SLX4Q8IY92 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SLX4Q8IY92 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
SLX4Q8IY92 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC22.03■■□□□ 1.12
SLX4Q8IY92 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLX4Q8IY92 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC22.02■■□□□ 1.12
SLX4Q8IY92 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC22.02■■□□□ 1.12
SLX4Q8IY92 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLX4Q8IY92 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLX4Q8IY92 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
SLX4Q8IY92 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLX4Q8IY92 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLX4Q8IY92 CALY-203ENST00000368558 825 ntTSL 5 BASIC22.02■■□□□ 1.12
SLX4Q8IY92 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLX4Q8IY92 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC22.02■■□□□ 1.12
SLX4Q8IY92 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SLX4Q8IY92 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
SLX4Q8IY92 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC22.02■■□□□ 1.12
SLX4Q8IY92 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC22.02■■□□□ 1.12
SLX4Q8IY92 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SLX4Q8IY92 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLX4Q8IY92 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SLX4Q8IY92 AC132938.6-201ENST00000623828 1655 ntBASIC22.02■■□□□ 1.11
SLX4Q8IY92 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC22.02■■□□□ 1.11
SLX4Q8IY92 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLX4Q8IY92 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLX4Q8IY92 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC22.01■■□□□ 1.11
SLX4Q8IY92 CRYGEP-201ENST00000412192 528 ntBASIC22.01■■□□□ 1.11
SLX4Q8IY92 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC22.01■■□□□ 1.11
SLX4Q8IY92 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SLX4Q8IY92 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC22.01■■□□□ 1.11
SLX4Q8IY92 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC22.01■■□□□ 1.11
SLX4Q8IY92 MIR4469-201ENST00000583919 79 ntBASIC22.01■■□□□ 1.11
SLX4Q8IY92 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC22.01■■□□□ 1.11
SLX4Q8IY92 AL513190.1-201ENST00000621254 727 ntBASIC22.01■■□□□ 1.11
SLX4Q8IY92 ORC5-208ENST00000626700 344 ntTSL 3 BASIC22.01■■□□□ 1.11
SLX4Q8IY92 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
SLX4Q8IY92 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC22.01■■□□□ 1.11
SLX4Q8IY92 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC22.01■■□□□ 1.11
SLX4Q8IY92 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
SLX4Q8IY92 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
SLX4Q8IY92 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC22.01■■□□□ 1.11
SLX4Q8IY92 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms