Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC22.71■■□□□ 1.23
COL23A1Q86Y22 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL23A1Q86Y22 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC22.71■■□□□ 1.23
COL23A1Q86Y22 METTL26-205ENST00000397666 726 ntTSL 2 BASIC22.71■■□□□ 1.23
COL23A1Q86Y22 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC22.71■■□□□ 1.23
COL23A1Q86Y22 HLA-J-203ENST00000494367 1087 ntBASIC22.71■■□□□ 1.23
COL23A1Q86Y22 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC22.71■■□□□ 1.23
COL23A1Q86Y22 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
COL23A1Q86Y22 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL23A1Q86Y22 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC22.71■■□□□ 1.23
COL23A1Q86Y22 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC22.71■■□□□ 1.23
COL23A1Q86Y22 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL23A1Q86Y22 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
COL23A1Q86Y22 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
COL23A1Q86Y22 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
COL23A1Q86Y22 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC22.7■■□□□ 1.22
COL23A1Q86Y22 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
COL23A1Q86Y22 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC22.7■■□□□ 1.22
COL23A1Q86Y22 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
COL23A1Q86Y22 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC22.7■■□□□ 1.22
COL23A1Q86Y22 MYLKP1-201ENST00000509077 1580 ntBASIC22.7■■□□□ 1.22
COL23A1Q86Y22 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
COL23A1Q86Y22 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
COL23A1Q86Y22 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
COL23A1Q86Y22 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
COL23A1Q86Y22 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
COL23A1Q86Y22 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
COL23A1Q86Y22 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
COL23A1Q86Y22 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
COL23A1Q86Y22 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC22.69■■□□□ 1.22
COL23A1Q86Y22 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
COL23A1Q86Y22 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
COL23A1Q86Y22 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC22.69■■□□□ 1.22
COL23A1Q86Y22 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC22.69■■□□□ 1.22
COL23A1Q86Y22 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC22.69■■□□□ 1.22
COL23A1Q86Y22 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
COL23A1Q86Y22 AC108073.2-201ENST00000464002 357 ntBASIC22.69■■□□□ 1.22
COL23A1Q86Y22 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
COL23A1Q86Y22 PUS1-205ENST00000535067 838 ntTSL 3 BASIC22.69■■□□□ 1.22
COL23A1Q86Y22 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC22.69■■□□□ 1.22
COL23A1Q86Y22 AD001527.2-201ENST00000622994 785 ntBASIC22.69■■□□□ 1.22
COL23A1Q86Y22 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
COL23A1Q86Y22 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
COL23A1Q86Y22 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC22.69■■□□□ 1.22
COL23A1Q86Y22 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL23A1Q86Y22 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL23A1Q86Y22 AC006504.4-201ENST00000592118 1568 ntBASIC22.68■■□□□ 1.22
COL23A1Q86Y22 SIGLEC16-201ENST00000599858 1437 ntBASIC22.68■■□□□ 1.22
COL23A1Q86Y22 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
COL23A1Q86Y22 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL23A1Q86Y22 PTMS-202ENST00000389462 773 ntTSL 2 BASIC22.68■■□□□ 1.22
COL23A1Q86Y22 TSEN15P1-201ENST00000423257 515 ntBASIC22.68■■□□□ 1.22
COL23A1Q86Y22 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
COL23A1Q86Y22 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC22.68■■□□□ 1.22
COL23A1Q86Y22 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC22.68■■□□□ 1.22
COL23A1Q86Y22 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL23A1Q86Y22 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC22.68■■□□□ 1.22
COL23A1Q86Y22 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC22.68■■□□□ 1.22
COL23A1Q86Y22 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC22.68■■□□□ 1.22
COL23A1Q86Y22 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL23A1Q86Y22 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL23A1Q86Y22 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL23A1Q86Y22 AL157384.1-201ENST00000445995 2473 ntBASIC22.68■■□□□ 1.22
COL23A1Q86Y22 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC22.68■■□□□ 1.22
COL23A1Q86Y22 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC22.68■■□□□ 1.22
COL23A1Q86Y22 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL23A1Q86Y22 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL23A1Q86Y22 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
COL23A1Q86Y22 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL23A1Q86Y22 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL23A1Q86Y22 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC22.67■■□□□ 1.22
COL23A1Q86Y22 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
COL23A1Q86Y22 ELK2BP-201ENST00000415014 1224 ntBASIC22.67■■□□□ 1.22
COL23A1Q86Y22 PNKD-204ENST00000436005 978 ntTSL 5 BASIC22.67■■□□□ 1.22
COL23A1Q86Y22 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC22.67■■□□□ 1.22
COL23A1Q86Y22 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC22.67■■□□□ 1.22
COL23A1Q86Y22 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC22.67■■□□□ 1.22
COL23A1Q86Y22 MIR4751-201ENST00000578027 74 ntBASIC22.67■■□□□ 1.22
COL23A1Q86Y22 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC22.67■■□□□ 1.22
COL23A1Q86Y22 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC22.67■■□□□ 1.22
COL23A1Q86Y22 AC004706.3-202ENST00000621574 984 ntBASIC22.67■■□□□ 1.22
COL23A1Q86Y22 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
COL23A1Q86Y22 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL23A1Q86Y22 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL23A1Q86Y22 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL23A1Q86Y22 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL23A1Q86Y22 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL23A1Q86Y22 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC22.67■■□□□ 1.22
COL23A1Q86Y22 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC22.67■■□□□ 1.22
COL23A1Q86Y22 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
COL23A1Q86Y22 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC22.66■■□□□ 1.22
COL23A1Q86Y22 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL23A1Q86Y22 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL23A1Q86Y22 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL23A1Q86Y22 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL23A1Q86Y22 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL23A1Q86Y22 SPDYE21P-201ENST00000413323 827 ntBASIC22.66■■□□□ 1.22
COL23A1Q86Y22 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC22.66■■□□□ 1.22
COL23A1Q86Y22 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC22.66■■□□□ 1.22
COL23A1Q86Y22 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC22.66■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 9.3 ms