Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VRK2Q86Y07 AC093010.1-201ENST00000473625 1624 ntBASIC16.84■□□□□ 0.29
VRK2Q86Y07 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VRK2Q86Y07 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VRK2Q86Y07 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VRK2Q86Y07 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.84■□□□□ 0.29
VRK2Q86Y07 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VRK2Q86Y07 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VRK2Q86Y07 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
VRK2Q86Y07 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.83■□□□□ 0.28
VRK2Q86Y07 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VRK2Q86Y07 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VRK2Q86Y07 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VRK2Q86Y07 GNAS-203ENST00000306120 1878 ntBASIC16.83■□□□□ 0.28
VRK2Q86Y07 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VRK2Q86Y07 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
VRK2Q86Y07 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VRK2Q86Y07 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
VRK2Q86Y07 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
VRK2Q86Y07 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VRK2Q86Y07 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
VRK2Q86Y07 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VRK2Q86Y07 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VRK2Q86Y07 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
VRK2Q86Y07 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
VRK2Q86Y07 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VRK2Q86Y07 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VRK2Q86Y07 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VRK2Q86Y07 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.83■□□□□ 0.28
VRK2Q86Y07 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VRK2Q86Y07 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VRK2Q86Y07 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VRK2Q86Y07 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.83■□□□□ 0.28
VRK2Q86Y07 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
VRK2Q86Y07 MIR3180-4-201ENST00000582223 153 ntBASIC16.83■□□□□ 0.28
VRK2Q86Y07 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
VRK2Q86Y07 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
VRK2Q86Y07 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
VRK2Q86Y07 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VRK2Q86Y07 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VRK2Q86Y07 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
VRK2Q86Y07 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VRK2Q86Y07 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VRK2Q86Y07 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.82■□□□□ 0.28
VRK2Q86Y07 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
VRK2Q86Y07 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.82■□□□□ 0.28
VRK2Q86Y07 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VRK2Q86Y07 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VRK2Q86Y07 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VRK2Q86Y07 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VRK2Q86Y07 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
VRK2Q86Y07 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.82■□□□□ 0.28
VRK2Q86Y07 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.82■□□□□ 0.28
VRK2Q86Y07 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VRK2Q86Y07 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.82■□□□□ 0.28
VRK2Q86Y07 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
VRK2Q86Y07 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VRK2Q86Y07 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VRK2Q86Y07 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.82■□□□□ 0.28
VRK2Q86Y07 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
VRK2Q86Y07 HMGA1P5-201ENST00000412453 271 ntBASIC16.82■□□□□ 0.28
VRK2Q86Y07 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VRK2Q86Y07 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.82■□□□□ 0.28
VRK2Q86Y07 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.82■□□□□ 0.28
VRK2Q86Y07 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VRK2Q86Y07 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
VRK2Q86Y07 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VRK2Q86Y07 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VRK2Q86Y07 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VRK2Q86Y07 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VRK2Q86Y07 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
VRK2Q86Y07 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VRK2Q86Y07 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VRK2Q86Y07 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
VRK2Q86Y07 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VRK2Q86Y07 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.82■□□□□ 0.28
VRK2Q86Y07 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VRK2Q86Y07 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.81■□□□□ 0.28
VRK2Q86Y07 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.81■□□□□ 0.28
VRK2Q86Y07 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.81■□□□□ 0.28
VRK2Q86Y07 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.81■□□□□ 0.28
VRK2Q86Y07 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VRK2Q86Y07 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VRK2Q86Y07 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VRK2Q86Y07 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VRK2Q86Y07 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VRK2Q86Y07 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VRK2Q86Y07 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.81■□□□□ 0.28
VRK2Q86Y07 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
VRK2Q86Y07 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VRK2Q86Y07 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VRK2Q86Y07 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VRK2Q86Y07 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VRK2Q86Y07 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VRK2Q86Y07 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.81■□□□□ 0.28
VRK2Q86Y07 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
VRK2Q86Y07 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.81■□□□□ 0.28
VRK2Q86Y07 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.81■□□□□ 0.28
VRK2Q86Y07 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.81■□□□□ 0.28
VRK2Q86Y07 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms