Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
YBX1P67809 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.74■□□□□ 0.43
YBX1P67809 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
YBX1P67809 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
YBX1P67809 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.74■□□□□ 0.43
YBX1P67809 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
YBX1P67809 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
YBX1P67809 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
YBX1P67809 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
YBX1P67809 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
YBX1P67809 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
YBX1P67809 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
YBX1P67809 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
YBX1P67809 AP000593.1-201ENST00000393668 712 ntBASIC17.74■□□□□ 0.43
YBX1P67809 STARP1-201ENST00000397973 869 ntBASIC17.74■□□□□ 0.43
YBX1P67809 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.74■□□□□ 0.43
YBX1P67809 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
YBX1P67809 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.74■□□□□ 0.43
YBX1P67809 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.74■□□□□ 0.43
YBX1P67809 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
YBX1P67809 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
YBX1P67809 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.74■□□□□ 0.43
YBX1P67809 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
YBX1P67809 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
YBX1P67809 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
YBX1P67809 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.74■□□□□ 0.43
YBX1P67809 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
YBX1P67809 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
YBX1P67809 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
YBX1P67809 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
YBX1P67809 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.74■□□□□ 0.43
YBX1P67809 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
YBX1P67809 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
YBX1P67809 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
YBX1P67809 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
YBX1P67809 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.74■□□□□ 0.43
YBX1P67809 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
YBX1P67809 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
YBX1P67809 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
YBX1P67809 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
YBX1P67809 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
YBX1P67809 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
YBX1P67809 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
YBX1P67809 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.73■□□□□ 0.43
YBX1P67809 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
YBX1P67809 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
YBX1P67809 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
YBX1P67809 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.73■□□□□ 0.43
YBX1P67809 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.73■□□□□ 0.43
YBX1P67809 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
YBX1P67809 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
YBX1P67809 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
YBX1P67809 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.73■□□□□ 0.43
YBX1P67809 AC112907.2-201ENST00000448639 330 ntBASIC17.73■□□□□ 0.43
YBX1P67809 AC092647.4-201ENST00000457211 535 ntBASIC17.73■□□□□ 0.43
YBX1P67809 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.73■□□□□ 0.43
YBX1P67809 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.73■□□□□ 0.43
YBX1P67809 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.73■□□□□ 0.43
YBX1P67809 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
YBX1P67809 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
YBX1P67809 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
YBX1P67809 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
YBX1P67809 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.73■□□□□ 0.43
YBX1P67809 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
YBX1P67809 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
YBX1P67809 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
YBX1P67809 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
YBX1P67809 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.73■□□□□ 0.43
YBX1P67809 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
YBX1P67809 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
YBX1P67809 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.72■□□□□ 0.43
YBX1P67809 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
YBX1P67809 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
YBX1P67809 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.72■□□□□ 0.43
YBX1P67809 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.72■□□□□ 0.43
YBX1P67809 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.72■□□□□ 0.43
YBX1P67809 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
YBX1P67809 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
YBX1P67809 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
YBX1P67809 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
YBX1P67809 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
YBX1P67809 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
YBX1P67809 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.72■□□□□ 0.43
YBX1P67809 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
YBX1P67809 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.72■□□□□ 0.43
YBX1P67809 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.72■□□□□ 0.43
YBX1P67809 KRT18P35-201ENST00000510488 1269 ntBASIC17.72■□□□□ 0.43
YBX1P67809 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.72■□□□□ 0.43
YBX1P67809 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.72■□□□□ 0.43
YBX1P67809 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.72■□□□□ 0.43
YBX1P67809 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.72■□□□□ 0.43
YBX1P67809 AL445228.2-201ENST00000605589 952 ntBASIC17.72■□□□□ 0.43
YBX1P67809 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.72■□□□□ 0.43
YBX1P67809 MYC-208ENST00000641036 567 ntBASIC17.72■□□□□ 0.43
YBX1P67809 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.72■□□□□ 0.43
YBX1P67809 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
YBX1P67809 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
YBX1P67809 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
YBX1P67809 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
YBX1P67809 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms