Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.82■□□□□ 0.28
PER3P56645 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.82■□□□□ 0.28
PER3P56645 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PER3P56645 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.82■□□□□ 0.28
PER3P56645 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PER3P56645 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PER3P56645 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.82■□□□□ 0.28
PER3P56645 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
PER3P56645 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.82■□□□□ 0.28
PER3P56645 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PER3P56645 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PER3P56645 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PER3P56645 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PER3P56645 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PER3P56645 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PER3P56645 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PER3P56645 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.82■□□□□ 0.28
PER3P56645 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PER3P56645 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PER3P56645 AC092597.1-201ENST00000487352 616 ntBASIC16.82■□□□□ 0.28
PER3P56645 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.82■□□□□ 0.28
PER3P56645 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PER3P56645 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.82■□□□□ 0.28
PER3P56645 AC091304.2-201ENST00000564639 760 ntBASIC16.82■□□□□ 0.28
PER3P56645 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.82■□□□□ 0.28
PER3P56645 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PER3P56645 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PER3P56645 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
PER3P56645 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PER3P56645 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PER3P56645 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PER3P56645 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.82■□□□□ 0.28
PER3P56645 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PER3P56645 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PER3P56645 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PER3P56645 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PER3P56645 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PER3P56645 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PER3P56645 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PER3P56645 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PER3P56645 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PER3P56645 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.81■□□□□ 0.28
PER3P56645 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PER3P56645 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PER3P56645 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PER3P56645 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PER3P56645 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PER3P56645 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
PER3P56645 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.81■□□□□ 0.28
PER3P56645 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PER3P56645 KRT18P1-202ENST00000452408 1331 ntBASIC16.81■□□□□ 0.28
PER3P56645 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PER3P56645 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PER3P56645 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PER3P56645 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.81■□□□□ 0.28
PER3P56645 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PER3P56645 AP000347.1-202ENST00000435868 847 ntBASIC16.81■□□□□ 0.28
PER3P56645 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.81■□□□□ 0.28
PER3P56645 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PER3P56645 UNC93B7-201ENST00000509439 705 ntBASIC16.81■□□□□ 0.28
PER3P56645 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.81■□□□□ 0.28
PER3P56645 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.81■□□□□ 0.28
PER3P56645 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
PER3P56645 MIR3180-1-201ENST00000580374 94 ntBASIC16.81■□□□□ 0.28
PER3P56645 MIR3180-3-201ENST00000584616 94 ntBASIC16.81■□□□□ 0.28
PER3P56645 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.81■□□□□ 0.28
PER3P56645 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
PER3P56645 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.81■□□□□ 0.28
PER3P56645 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.81■□□□□ 0.28
PER3P56645 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PER3P56645 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PER3P56645 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PER3P56645 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.81■□□□□ 0.28
PER3P56645 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PER3P56645 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
PER3P56645 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PER3P56645 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PER3P56645 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PER3P56645 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
PER3P56645 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PER3P56645 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PER3P56645 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PER3P56645 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.81■□□□□ 0.28
PER3P56645 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PER3P56645 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PER3P56645 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
PER3P56645 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PER3P56645 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PER3P56645 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PER3P56645 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PER3P56645 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PER3P56645 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PER3P56645 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.8■□□□□ 0.28
PER3P56645 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.8■□□□□ 0.28
PER3P56645 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.8■□□□□ 0.28
PER3P56645 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.8■□□□□ 0.28
PER3P56645 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PER3P56645 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.8■□□□□ 0.28
PER3P56645 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PER3P56645 AP000593.1-201ENST00000393668 712 ntBASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms