Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 RPAIN-207ENST00000570883 953 ntTSL 212.33□□□□□ -0.443e-8■■□□□ 11.6
NCBP2P52298 RPAIN-216ENST00000575599 1359 ntTSL 212.22□□□□□ -0.453e-8■■□□□ 11.6
NCBP2P52298 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC11.79□□□□□ -0.523e-8■■□□□ 11.6
NCBP2P52298 RPAIN-212ENST00000573126 2728 ntTSL 210.61□□□□□ -0.713e-8■■□□□ 11.6
NCBP2P52298 RPAIN-214ENST00000574003 561 ntTSL 4 BASIC10.33□□□□□ -0.763e-8■■□□□ 11.6
NCBP2P52298 RPAIN-204ENST00000405578 1083 ntTSL 2 BASIC9.83□□□□□ -0.843e-8■■□□□ 11.6
NCBP2P52298 RPAIN-215ENST00000575112 3817 ntTSL 28.11□□□□□ -1.113e-8■■□□□ 11.6
NCBP2P52298 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.762e-10■■□□□ 11.6
NCBP2P52298 GRINA-205ENST00000529301 1075 ntTSL 319.19■□□□□ 0.662e-10■■□□□ 11.6
NCBP2P52298 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.652e-10■■□□□ 11.6
NCBP2P52298 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.49■□□□□ 0.554e-8■■□□□ 11.6
NCBP2P52298 FRS2-202ENST00000547219 611 ntTSL 515.65■□□□□ 0.14e-8■■□□□ 11.6
NCBP2P52298 FRS2-207ENST00000550169 570 ntTSL 315.65■□□□□ 0.14e-8■■□□□ 11.6
NCBP2P52298 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.044e-8■■□□□ 11.6
NCBP2P52298 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.87□□□□□ -0.192e-10■■□□□ 11.6
NCBP2P52298 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.24e-8■■□□□ 11.6
NCBP2P52298 LCLAT1-206ENST00000466477 583 ntTSL 313.72□□□□□ -0.214e-8■■□□□ 11.6
NCBP2P52298 FRS2-204ENST00000548154 597 ntTSL 213.22□□□□□ -0.294e-8■■□□□ 11.6
NCBP2P52298 SDCBP2-AS1-205ENST00000609745 855 ntTSL 413.02□□□□□ -0.332e-10■■□□□ 11.6
NCBP2P52298 FRS2-203ENST00000547414 521 ntTSL 512.75□□□□□ -0.374e-8■■□□□ 11.6
NCBP2P52298 FRS2-210ENST00000550937 781 ntTSL 512.75□□□□□ -0.374e-8■■□□□ 11.6
NCBP2P52298 FRS2-208ENST00000550316 545 ntTSL 512.6□□□□□ -0.394e-8■■□□□ 11.6
NCBP2P52298 FRS2-205ENST00000549092 584 ntTSL 412.44□□□□□ -0.424e-8■■□□□ 11.6
NCBP2P52298 SDCBP2-AS1-203ENST00000609285 561 ntTSL 412.12□□□□□ -0.472e-10■■□□□ 11.6
NCBP2P52298 AC109326.1-201ENST00000624705 1321 ntBASIC11.94□□□□□ -0.56e-17■■□□□ 11.6
NCBP2P52298 GDI2-209ENST00000609712 622 ntTSL 311.24□□□□□ -0.614e-8■■□□□ 11.6
NCBP2P52298 GDI2-206ENST00000456041 918 ntTSL 511.24□□□□□ -0.614e-8■■□□□ 11.6
NCBP2P52298 SDCBP2-AS1-204ENST00000609470 2158 ntTSL 1 (best) BASIC10.77□□□□□ -0.682e-10■■□□□ 11.6
NCBP2P52298 GDI2-202ENST00000380181 1408 ntTSL 1 (best) BASIC10.59□□□□□ -0.714e-8■■□□□ 11.6
NCBP2P52298 LCLAT1-211ENST00000491680 1610 ntTSL 210.58□□□□□ -0.724e-8■■□□□ 11.6
NCBP2P52298 GDI2-204ENST00000418688 636 ntTSL 510.03□□□□□ -0.84e-8■■□□□ 11.6
NCBP2P52298 LCLAT1-204ENST00000465200 582 ntTSL 39.9□□□□□ -0.824e-8■■□□□ 11.6
NCBP2P52298 PTAR1-201ENST00000340434 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.884e-8■■□□□ 11.6
NCBP2P52298 LCLAT1-202ENST00000319406 2774 ntTSL 2 BASIC9.44□□□□□ -0.94e-8■■□□□ 11.6
NCBP2P52298 LCLAT1-209ENST00000478015 1862 ntTSL 29.33□□□□□ -0.924e-8■■□□□ 11.6
NCBP2P52298 SDCBP2-AS1-202ENST00000607947 808 ntTSL 3 BASIC8.67□□□□□ -1.022e-10■■□□□ 11.6
NCBP2P52298 LCLAT1-207ENST00000476038 584 ntTSL 38.52□□□□□ -1.054e-8■■□□□ 11.6
NCBP2P52298 LCLAT1-201ENST00000309052 5060 ntTSL 1 (best) BASIC8.22□□□□□ -1.094e-8■■□□□ 11.6
NCBP2P52298 GDI2-201ENST00000380127 584 ntTSL 37.66□□□□□ -1.184e-8■■□□□ 11.6
NCBP2P52298 GDI2-208ENST00000608581 634 ntTSL 37.41□□□□□ -1.224e-8■■□□□ 11.6
NCBP2P52298 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC6.77□□□□□ -1.332e-10■■□□□ 11.6
NCBP2P52298 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.44e-8■■□□□ 11.6
NCBP2P52298 LCLAT1-205ENST00000465538 560 ntTSL 56.02□□□□□ -1.454e-8■■□□□ 11.6
NCBP2P52298 LCLAT1-210ENST00000488144 536 ntTSL 35.71□□□□□ -1.54e-8■■□□□ 11.6
NCBP2P52298 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.584e-8■■□□□ 11.6
NCBP2P52298 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.78□□□□□ -1.84e-8■■□□□ 11.6
NCBP2P52298 PTAR1-206ENST00000474925 616 ntTSL 23.37□□□□□ -1.874e-8■■□□□ 11.6
NCBP2P52298 ZMYM2-211ENST00000620447 1069 ntTSL 1 (best)2.97□□□□□ -1.934e-8■■□□□ 11.6
NCBP2P52298 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.9□□□□□ -0.183e-9■■□□□ 11.6
NCBP2P52298 ADK-204ENST00000478611 443 ntTSL 311.28□□□□□ -0.63e-9■■□□□ 11.6
NCBP2P52298 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC6.68□□□□□ -1.343e-9■■□□□ 11.6
NCBP2P52298 EEF1D-244ENST00000532543 791 ntTSL 314.45□□□□□ -0.15e-7■■□□□ 11.6
NCBP2P52298 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.221e-36■■□□□ 11.6
NCBP2P52298 RPS12-202ENST00000484616 639 ntTSL 22.6□□□□□ -1.991e-36■■□□□ 11.6
NCBP2P52298 SGSM2-207ENST00000573062 1335 ntTSL 225.75■■□□□ 1.713e-8■■□□□ 11.6
NCBP2P52298 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC24.2■■□□□ 1.463e-8■■□□□ 11.6
NCBP2P52298 SGSM2-205ENST00000572875 460 ntTSL 322.14■■□□□ 1.133e-8■■□□□ 11.6
NCBP2P52298 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.88■□□□□ 0.773e-8■■□□□ 11.6
NCBP2P52298 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.583e-8■■□□□ 11.6
NCBP2P52298 PIK3C2A-202ENST00000503729 226 ntTSL 518.4■□□□□ 0.543e-8■■□□□ 11.6
NCBP2P52298 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.433e-8■■□□□ 11.6
NCBP2P52298 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.353e-8■■□□□ 11.6
NCBP2P52298 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.33e-8■■□□□ 11.6
NCBP2P52298 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.243e-8■■□□□ 11.6
NCBP2P52298 TSPAN9-204ENST00000444315 570 ntTSL 415.44■□□□□ 0.063e-8■■□□□ 11.6
NCBP2P52298 PIK3C2A-203ENST00000531428 1593 ntTSL 1 (best)14.88□□□□□ -0.033e-8■■□□□ 11.6
NCBP2P52298 PIK3C2A-204ENST00000532035 584 ntTSL 314.86□□□□□ -0.033e-8■■□□□ 11.6
NCBP2P52298 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.063e-8■■□□□ 11.6
NCBP2P52298 EIF4A1-219ENST00000581770 447 ntTSL 212.35□□□□□ -0.433e-8■■□□□ 11.6
NCBP2P52298 EIF4A1-205ENST00000577738 531 ntTSL 211.96□□□□□ -0.493e-8■■□□□ 11.6
NCBP2P52298 KAT2A-202ENST00000465682 2990 ntTSL 511.93□□□□□ -0.53e-8■■□□□ 11.6
NCBP2P52298 TSPAN9-207ENST00000539631 584 ntTSL 311.81□□□□□ -0.523e-8■■□□□ 11.6
NCBP2P52298 TSPAN9-201ENST00000011898 4323 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.563e-8■■□□□ 11.6
NCBP2P52298 TSPAN9-206ENST00000537971 4284 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.573e-8■■□□□ 11.6
NCBP2P52298 SGSM2-211ENST00000574563 3410 ntTSL 2 BASIC10.64□□□□□ -0.713e-8■■□□□ 11.6
NCBP2P52298 PIK3C2A-205ENST00000533645 2101 ntTSL 510.12□□□□□ -0.793e-8■■□□□ 11.6
NCBP2P52298 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC8.97□□□□□ -0.973e-8■■□□□ 11.6
NCBP2P52298 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC7.43□□□□□ -1.223e-8■■□□□ 11.6
NCBP2P52298 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.31□□□□□ -1.243e-8■■□□□ 11.6
NCBP2P52298 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.53■□□□□ 0.889e-8■■□□□ 11.6
NCBP2P52298 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.759e-8■■□□□ 11.6
NCBP2P52298 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.79e-8■■□□□ 11.6
NCBP2P52298 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.79■□□□□ 0.69e-8■■□□□ 11.6
NCBP2P52298 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.419e-8■■□□□ 11.6
NCBP2P52298 ZGPAT-205ENST00000431125 427 ntTSL 217.32■□□□□ 0.369e-8■■□□□ 11.6
NCBP2P52298 ZGPAT-209ENST00000477340 2831 ntTSL 214.87□□□□□ -0.039e-8■■□□□ 11.6
NCBP2P52298 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.633e-16■■□□□ 11.6
NCBP2P52298 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.7■□□□□ 0.263e-16■■□□□ 11.6
NCBP2P52298 SRPK2-211ENST00000482862 329 ntTSL 520■□□□□ 0.797e-8■■□□□ 11.6
NCBP2P52298 SRPK2-212ENST00000482897 715 ntTSL 519.49■□□□□ 0.717e-8■■□□□ 11.6
NCBP2P52298 SRPK2-206ENST00000465112 568 ntTSL 313.18□□□□□ -0.37e-8■■□□□ 11.6
NCBP2P52298 SRPK2-203ENST00000460391 666 ntTSL 212.64□□□□□ -0.397e-8■■□□□ 11.6
NCBP2P52298 SRPK2-204ENST00000462282 505 ntTSL 311.27□□□□□ -0.617e-8■■□□□ 11.6
NCBP2P52298 SRPK2-202ENST00000393651 3650 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.927e-8■■□□□ 11.6
NCBP2P52298 JMJD6-204ENST00000542934 1898 ntTSL 217.24■□□□□ 0.352e-8■■□□□ 11.5
NCBP2P52298 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.332e-8■■□□□ 11.5
NCBP2P52298 JMJD6-201ENST00000303996 1893 ntTSL 216.9■□□□□ 0.32e-8■■□□□ 11.5
NCBP2P52298 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.51■□□□□ 0.232e-8■■□□□ 11.5
NCBP2P52298 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.69□□□□□ -0.222e-8■■□□□ 11.5
NCBP2P52298 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.67□□□□□ -0.222e-8■■□□□ 11.5
Retrieved 100 of 18,329 protein–RNA pairs in 151.5 ms