Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HOXC6P09630 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HOXC6P09630 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HOXC6P09630 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
HOXC6P09630 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.49■□□□□ 0.87
HOXC6P09630 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.49■□□□□ 0.87
HOXC6P09630 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.49■□□□□ 0.87
HOXC6P09630 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.49■□□□□ 0.87
HOXC6P09630 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HOXC6P09630 AC055717.3-201ENST00000622967 595 ntBASIC20.49■□□□□ 0.87
HOXC6P09630 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HOXC6P09630 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.49■□□□□ 0.87
HOXC6P09630 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
HOXC6P09630 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.49■□□□□ 0.87
HOXC6P09630 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HOXC6P09630 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.48■□□□□ 0.87
HOXC6P09630 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.48■□□□□ 0.87
HOXC6P09630 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HOXC6P09630 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HOXC6P09630 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HOXC6P09630 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.48■□□□□ 0.87
HOXC6P09630 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HOXC6P09630 UPF3AP3-201ENST00000420996 769 ntBASIC20.48■□□□□ 0.87
HOXC6P09630 AC092910.1-201ENST00000482027 1129 ntBASIC20.48■□□□□ 0.87
HOXC6P09630 RNA5SP415-201ENST00000517246 115 ntBASIC20.48■□□□□ 0.87
HOXC6P09630 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
HOXC6P09630 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
HOXC6P09630 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
HOXC6P09630 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HOXC6P09630 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HOXC6P09630 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HOXC6P09630 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HOXC6P09630 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HOXC6P09630 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
HOXC6P09630 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HOXC6P09630 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HOXC6P09630 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
HOXC6P09630 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
HOXC6P09630 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
HOXC6P09630 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HOXC6P09630 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HOXC6P09630 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HOXC6P09630 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HOXC6P09630 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
HOXC6P09630 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
HOXC6P09630 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.47■□□□□ 0.87
HOXC6P09630 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HOXC6P09630 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HOXC6P09630 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.47■□□□□ 0.87
HOXC6P09630 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HOXC6P09630 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HOXC6P09630 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.47■□□□□ 0.87
HOXC6P09630 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
HOXC6P09630 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.47■□□□□ 0.87
HOXC6P09630 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.47■□□□□ 0.87
HOXC6P09630 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.47■□□□□ 0.87
HOXC6P09630 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
HOXC6P09630 AL691403.2-201ENST00000618460 490 ntBASIC20.47■□□□□ 0.87
HOXC6P09630 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.47■□□□□ 0.87
HOXC6P09630 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HOXC6P09630 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.47■□□□□ 0.87
HOXC6P09630 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HOXC6P09630 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HOXC6P09630 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
HOXC6P09630 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HOXC6P09630 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
HOXC6P09630 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
HOXC6P09630 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HOXC6P09630 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HOXC6P09630 LINC01126-201ENST00000623515 1646 ntBASIC20.46■□□□□ 0.87
HOXC6P09630 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HOXC6P09630 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HOXC6P09630 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.46■□□□□ 0.87
HOXC6P09630 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HOXC6P09630 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.46■□□□□ 0.87
HOXC6P09630 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
HOXC6P09630 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HOXC6P09630 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.46■□□□□ 0.87
HOXC6P09630 RPSAP43-201ENST00000402237 625 ntBASIC20.46■□□□□ 0.87
HOXC6P09630 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.46■□□□□ 0.87
HOXC6P09630 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.46■□□□□ 0.87
HOXC6P09630 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.46■□□□□ 0.87
HOXC6P09630 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HOXC6P09630 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.46■□□□□ 0.87
HOXC6P09630 AP000867.4-201ENST00000641616 219 ntBASIC20.46■□□□□ 0.87
HOXC6P09630 AC107918.4-202ENST00000641623 219 ntBASIC20.46■□□□□ 0.87
HOXC6P09630 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.46■□□□□ 0.87
HOXC6P09630 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HOXC6P09630 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HOXC6P09630 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HOXC6P09630 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HOXC6P09630 AC099343.3-201ENST00000605834 2503 ntBASIC20.46■□□□□ 0.87
HOXC6P09630 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HOXC6P09630 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HOXC6P09630 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HOXC6P09630 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
HOXC6P09630 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.45■□□□□ 0.86
HOXC6P09630 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HOXC6P09630 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HOXC6P09630 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms