Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VTNP04004 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.88■□□□□ 0.77
VTNP04004 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
VTNP04004 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
VTNP04004 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VTNP04004 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.88■□□□□ 0.77
VTNP04004 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VTNP04004 TP73-AS1-210ENST00000637775 1455 ntBASIC19.88■□□□□ 0.77
VTNP04004 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VTNP04004 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.88■□□□□ 0.77
VTNP04004 KRT18P65-201ENST00000439811 1286 ntBASIC19.88■□□□□ 0.77
VTNP04004 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.88■□□□□ 0.77
VTNP04004 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.88■□□□□ 0.77
VTNP04004 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.88■□□□□ 0.77
VTNP04004 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.88■□□□□ 0.77
VTNP04004 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.88■□□□□ 0.77
VTNP04004 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VTNP04004 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VTNP04004 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VTNP04004 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VTNP04004 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VTNP04004 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VTNP04004 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
VTNP04004 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VTNP04004 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.87■□□□□ 0.77
VTNP04004 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.87■□□□□ 0.77
VTNP04004 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.87■□□□□ 0.77
VTNP04004 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VTNP04004 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.87■□□□□ 0.77
VTNP04004 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VTNP04004 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
VTNP04004 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VTNP04004 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.87■□□□□ 0.77
VTNP04004 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VTNP04004 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.87■□□□□ 0.77
VTNP04004 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VTNP04004 MRPL3P1-201ENST00000400109 1033 ntBASIC19.87■□□□□ 0.77
VTNP04004 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.87■□□□□ 0.77
VTNP04004 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VTNP04004 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.87■□□□□ 0.77
VTNP04004 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VTNP04004 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VTNP04004 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VTNP04004 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
VTNP04004 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
VTNP04004 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
VTNP04004 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VTNP04004 AC132938.6-201ENST00000623828 1655 ntBASIC19.87■□□□□ 0.77
VTNP04004 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
VTNP04004 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
VTNP04004 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VTNP04004 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.86■□□□□ 0.77
VTNP04004 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTNP04004 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTNP04004 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTNP04004 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VTNP04004 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VTNP04004 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTNP04004 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTNP04004 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTNP04004 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTNP04004 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTNP04004 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTNP04004 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTNP04004 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VTNP04004 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
VTNP04004 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTNP04004 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTNP04004 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.86■□□□□ 0.77
VTNP04004 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTNP04004 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
VTNP04004 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.86■□□□□ 0.77
VTNP04004 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.86■□□□□ 0.77
VTNP04004 SLC25A6P4-201ENST00000586535 553 ntBASIC19.86■□□□□ 0.77
VTNP04004 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.86■□□□□ 0.77
VTNP04004 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
VTNP04004 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.86■□□□□ 0.77
VTNP04004 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTNP04004 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTNP04004 AC098818.2-201ENST00000564925 2320 ntBASIC19.86■□□□□ 0.77
VTNP04004 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VTNP04004 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTNP04004 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTNP04004 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTNP04004 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.85■□□□□ 0.77
VTNP04004 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
VTNP04004 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VTNP04004 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
VTNP04004 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
VTNP04004 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VTNP04004 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
VTNP04004 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VTNP04004 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.85■□□□□ 0.77
VTNP04004 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
VTNP04004 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.85■□□□□ 0.77
VTNP04004 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.85■□□□□ 0.77
VTNP04004 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.85■□□□□ 0.77
VTNP04004 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.85■□□□□ 0.77
VTNP04004 AC132008.2-207ENST00000454517 770 ntBASIC19.85■□□□□ 0.77
VTNP04004 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms