Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIX6O95475 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIX6O95475 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIX6O95475 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.25■□□□□ 0.03
SIX6O95475 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIX6O95475 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIX6O95475 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIX6O95475 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.25■□□□□ 0.03
SIX6O95475 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.25■□□□□ 0.03
SIX6O95475 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIX6O95475 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIX6O95475 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIX6O95475 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
SIX6O95475 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC15.25■□□□□ 0.03
SIX6O95475 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC15.25■□□□□ 0.03
SIX6O95475 TUBB8P6-201ENST00000436895 1288 ntBASIC15.25■□□□□ 0.03
SIX6O95475 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SIX6O95475 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SIX6O95475 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SIX6O95475 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC15.25■□□□□ 0.03
SIX6O95475 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIX6O95475 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIX6O95475 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SIX6O95475 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
SIX6O95475 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIX6O95475 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SIX6O95475 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SIX6O95475 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.25■□□□□ 0.03
SIX6O95475 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIX6O95475 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SIX6O95475 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIX6O95475 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
SIX6O95475 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIX6O95475 AC010980.2-201ENST00000587099 1412 ntBASIC15.25■□□□□ 0.03
SIX6O95475 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SIX6O95475 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.25■□□□□ 0.03
SIX6O95475 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SIX6O95475 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.25■□□□□ 0.03
SIX6O95475 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
SIX6O95475 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC15.25■□□□□ 0.03
SIX6O95475 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIX6O95475 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.24■□□□□ 0.03
SIX6O95475 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIX6O95475 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIX6O95475 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
SIX6O95475 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIX6O95475 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SIX6O95475 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIX6O95475 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SIX6O95475 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SIX6O95475 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SIX6O95475 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.24■□□□□ 0.03
SIX6O95475 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SIX6O95475 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIX6O95475 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIX6O95475 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIX6O95475 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC15.24■□□□□ 0.03
SIX6O95475 RPS2P52-201ENST00000469610 820 ntBASIC15.24■□□□□ 0.03
SIX6O95475 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC15.24■□□□□ 0.03
SIX6O95475 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC15.24■□□□□ 0.03
SIX6O95475 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC15.24■□□□□ 0.03
SIX6O95475 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC15.24■□□□□ 0.03
SIX6O95475 AC069236.1-201ENST00000604339 616 ntBASIC15.24■□□□□ 0.03
SIX6O95475 AC005181.1-201ENST00000604782 1256 ntBASIC15.24■□□□□ 0.03
SIX6O95475 RAB43-208ENST00000615093 783 ntTSL 5 BASIC15.24■□□□□ 0.03
SIX6O95475 BID-214ENST00000617586 542 ntTSL 5 BASIC15.24■□□□□ 0.03
SIX6O95475 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIX6O95475 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIX6O95475 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.24■□□□□ 0.03
SIX6O95475 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.24■□□□□ 0.03
SIX6O95475 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SIX6O95475 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.24■□□□□ 0.03
SIX6O95475 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.24■□□□□ 0.03
SIX6O95475 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SIX6O95475 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIX6O95475 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIX6O95475 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SIX6O95475 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIX6O95475 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIX6O95475 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.24■□□□□ 0.03
SIX6O95475 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.24■□□□□ 0.03
SIX6O95475 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SIX6O95475 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.24■□□□□ 0.03
SIX6O95475 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIX6O95475 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIX6O95475 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIX6O95475 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SIX6O95475 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SIX6O95475 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SIX6O95475 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SIX6O95475 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIX6O95475 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIX6O95475 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.23■□□□□ 0.03
SIX6O95475 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIX6O95475 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SIX6O95475 KRT8P32-201ENST00000512863 1461 ntBASIC15.23■□□□□ 0.03
SIX6O95475 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.23■□□□□ 0.03
SIX6O95475 JTB-203ENST00000368589 1216 ntTSL 2 BASIC15.23■□□□□ 0.03
SIX6O95475 CNN2P6-201ENST00000439038 900 ntBASIC15.23■□□□□ 0.03
SIX6O95475 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms