Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE3O75131 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CPNE3O75131 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.47■□□□□ 0.39
CPNE3O75131 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.47■□□□□ 0.39
CPNE3O75131 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE3O75131 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE3O75131 MTMR9LP-203ENST00000426597 1545 ntBASIC17.47■□□□□ 0.39
CPNE3O75131 KRT8P50-201ENST00000562022 1438 ntBASIC17.47■□□□□ 0.39
CPNE3O75131 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE3O75131 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE3O75131 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CPNE3O75131 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CPNE3O75131 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.46■□□□□ 0.39
CPNE3O75131 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE3O75131 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.46■□□□□ 0.39
CPNE3O75131 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE3O75131 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE3O75131 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE3O75131 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CPNE3O75131 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE3O75131 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.46■□□□□ 0.39
CPNE3O75131 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE3O75131 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CPNE3O75131 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE3O75131 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE3O75131 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE3O75131 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE3O75131 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE3O75131 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.46■□□□□ 0.39
CPNE3O75131 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE3O75131 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.46■□□□□ 0.39
CPNE3O75131 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.46■□□□□ 0.39
CPNE3O75131 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.46■□□□□ 0.39
CPNE3O75131 KRT18P41-201ENST00000518924 1277 ntBASIC17.46■□□□□ 0.39
CPNE3O75131 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE3O75131 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.46■□□□□ 0.39
CPNE3O75131 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE3O75131 GPR32P1-201ENST00000601788 811 ntBASIC17.46■□□□□ 0.39
CPNE3O75131 AC024563.2-201ENST00000603282 481 ntBASIC17.46■□□□□ 0.39
CPNE3O75131 AL390719.2-201ENST00000606993 987 ntBASIC17.46■□□□□ 0.39
CPNE3O75131 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE3O75131 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE3O75131 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.46■□□□□ 0.39
CPNE3O75131 AC083906.6-201ENST00000641366 219 ntBASIC17.46■□□□□ 0.39
CPNE3O75131 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.46■□□□□ 0.39
CPNE3O75131 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CPNE3O75131 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.46■□□□□ 0.39
CPNE3O75131 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CPNE3O75131 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE3O75131 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE3O75131 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE3O75131 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CPNE3O75131 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE3O75131 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.45■□□□□ 0.38
CPNE3O75131 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.45■□□□□ 0.38
CPNE3O75131 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.45■□□□□ 0.38
CPNE3O75131 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE3O75131 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE3O75131 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CPNE3O75131 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE3O75131 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE3O75131 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE3O75131 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE3O75131 AL161938.1-201ENST00000569833 2180 ntBASIC17.45■□□□□ 0.38
CPNE3O75131 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE3O75131 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE3O75131 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE3O75131 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE3O75131 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CPNE3O75131 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE3O75131 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.45■□□□□ 0.38
CPNE3O75131 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.45■□□□□ 0.38
CPNE3O75131 DRAXINP1-201ENST00000437611 948 ntBASIC17.45■□□□□ 0.38
CPNE3O75131 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE3O75131 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE3O75131 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE3O75131 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.45■□□□□ 0.38
CPNE3O75131 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.45■□□□□ 0.38
CPNE3O75131 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.45■□□□□ 0.38
CPNE3O75131 AC090616.6-201ENST00000582640 721 ntBASIC17.45■□□□□ 0.38
CPNE3O75131 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.45■□□□□ 0.38
CPNE3O75131 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.45■□□□□ 0.38
CPNE3O75131 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.45■□□□□ 0.38
CPNE3O75131 AC106820.2-201ENST00000563775 3264 ntBASIC17.45■□□□□ 0.38
CPNE3O75131 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE3O75131 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CPNE3O75131 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE3O75131 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE3O75131 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE3O75131 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE3O75131 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE3O75131 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CPNE3O75131 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE3O75131 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE3O75131 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE3O75131 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE3O75131 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.44■□□□□ 0.38
CPNE3O75131 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CPNE3O75131 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE3O75131 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms