Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC163A0A0D9SF12 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC163A0A0D9SF12 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC163A0A0D9SF12 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC163A0A0D9SF12 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.94■□□□□ 0.46
CCDC163A0A0D9SF12 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CCDC163A0A0D9SF12 AC211486.1-202ENST00000416371 468 ntBASIC17.94■□□□□ 0.46
CCDC163A0A0D9SF12 MCCD1P2-201ENST00000423228 335 ntBASIC17.94■□□□□ 0.46
CCDC163A0A0D9SF12 KRT18P27-201ENST00000427733 1299 ntBASIC17.94■□□□□ 0.46
CCDC163A0A0D9SF12 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CCDC163A0A0D9SF12 AC211476.1-201ENST00000503899 468 ntBASIC17.94■□□□□ 0.46
CCDC163A0A0D9SF12 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC163A0A0D9SF12 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC163A0A0D9SF12 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC163A0A0D9SF12 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC163A0A0D9SF12 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC163A0A0D9SF12 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC163A0A0D9SF12 AC073592.4-201ENST00000623827 446 ntBASIC17.94■□□□□ 0.46
CCDC163A0A0D9SF12 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC163A0A0D9SF12 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC163A0A0D9SF12 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC163A0A0D9SF12 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC163A0A0D9SF12 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC163A0A0D9SF12 SLC25A24-204ENST00000569674 2357 ntBASIC17.94■□□□□ 0.46
CCDC163A0A0D9SF12 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
CCDC163A0A0D9SF12 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC163A0A0D9SF12 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC163A0A0D9SF12 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC163A0A0D9SF12 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC163A0A0D9SF12 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC163A0A0D9SF12 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC163A0A0D9SF12 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
CCDC163A0A0D9SF12 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.93■□□□□ 0.46
CCDC163A0A0D9SF12 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CCDC163A0A0D9SF12 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC163A0A0D9SF12 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC163A0A0D9SF12 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CCDC163A0A0D9SF12 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC163A0A0D9SF12 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CCDC163A0A0D9SF12 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CCDC163A0A0D9SF12 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.93■□□□□ 0.46
CCDC163A0A0D9SF12 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC163A0A0D9SF12 AC007967.2-201ENST00000432613 625 ntBASIC17.93■□□□□ 0.46
CCDC163A0A0D9SF12 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC163A0A0D9SF12 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.93■□□□□ 0.46
CCDC163A0A0D9SF12 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.93■□□□□ 0.46
CCDC163A0A0D9SF12 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC163A0A0D9SF12 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC163A0A0D9SF12 AC005593.1-201ENST00000624894 515 ntBASIC17.93■□□□□ 0.46
CCDC163A0A0D9SF12 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC163A0A0D9SF12 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC163A0A0D9SF12 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CCDC163A0A0D9SF12 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC163A0A0D9SF12 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC163A0A0D9SF12 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CCDC163A0A0D9SF12 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC163A0A0D9SF12 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC163A0A0D9SF12 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CCDC163A0A0D9SF12 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC163A0A0D9SF12 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC163A0A0D9SF12 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CCDC163A0A0D9SF12 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC163A0A0D9SF12 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC163A0A0D9SF12 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CCDC163A0A0D9SF12 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CCDC163A0A0D9SF12 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.92■□□□□ 0.46
CCDC163A0A0D9SF12 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC163A0A0D9SF12 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.92■□□□□ 0.46
CCDC163A0A0D9SF12 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.92■□□□□ 0.46
CCDC163A0A0D9SF12 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC163A0A0D9SF12 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.92■□□□□ 0.46
CCDC163A0A0D9SF12 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC163A0A0D9SF12 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC163A0A0D9SF12 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC163A0A0D9SF12 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC163A0A0D9SF12 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC163A0A0D9SF12 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC163A0A0D9SF12 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
CCDC163A0A0D9SF12 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC163A0A0D9SF12 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC163A0A0D9SF12 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC163A0A0D9SF12 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CCDC163A0A0D9SF12 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC163A0A0D9SF12 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC163A0A0D9SF12 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC163A0A0D9SF12 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC163A0A0D9SF12 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC163A0A0D9SF12 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC163A0A0D9SF12 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC163A0A0D9SF12 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CCDC163A0A0D9SF12 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC163A0A0D9SF12 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC163A0A0D9SF12 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC163A0A0D9SF12 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC163A0A0D9SF12 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC163A0A0D9SF12 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC163A0A0D9SF12 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CCDC163A0A0D9SF12 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CCDC163A0A0D9SF12 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC163A0A0D9SF12 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms