Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLIC4Q9Y696 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.8■□□□□ 0.92
CLIC4Q9Y696 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLIC4Q9Y696 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
CLIC4Q9Y696 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.8■□□□□ 0.92
CLIC4Q9Y696 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.8■□□□□ 0.92
CLIC4Q9Y696 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLIC4Q9Y696 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLIC4Q9Y696 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.8■□□□□ 0.92
CLIC4Q9Y696 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.8■□□□□ 0.92
CLIC4Q9Y696 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CLIC4Q9Y696 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLIC4Q9Y696 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.8■□□□□ 0.92
CLIC4Q9Y696 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.8■□□□□ 0.92
CLIC4Q9Y696 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CLIC4Q9Y696 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.8■□□□□ 0.92
CLIC4Q9Y696 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLIC4Q9Y696 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.8■□□□□ 0.92
CLIC4Q9Y696 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLIC4Q9Y696 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.8■□□□□ 0.92
CLIC4Q9Y696 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLIC4Q9Y696 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
CLIC4Q9Y696 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLIC4Q9Y696 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CLIC4Q9Y696 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CLIC4Q9Y696 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLIC4Q9Y696 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
CLIC4Q9Y696 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLIC4Q9Y696 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLIC4Q9Y696 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
CLIC4Q9Y696 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLIC4Q9Y696 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.79■□□□□ 0.92
CLIC4Q9Y696 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLIC4Q9Y696 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLIC4Q9Y696 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLIC4Q9Y696 HMGA1P5-201ENST00000412453 271 ntBASIC20.79■□□□□ 0.92
CLIC4Q9Y696 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLIC4Q9Y696 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.79■□□□□ 0.92
CLIC4Q9Y696 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.79■□□□□ 0.92
CLIC4Q9Y696 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.79■□□□□ 0.92
CLIC4Q9Y696 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.79■□□□□ 0.92
CLIC4Q9Y696 AC066615.1-201ENST00000640911 628 ntBASIC20.79■□□□□ 0.92
CLIC4Q9Y696 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.79■□□□□ 0.92
CLIC4Q9Y696 LINC01568-207ENST00000641790 1380 ntBASIC20.79■□□□□ 0.92
CLIC4Q9Y696 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLIC4Q9Y696 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLIC4Q9Y696 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CLIC4Q9Y696 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CLIC4Q9Y696 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.78■□□□□ 0.92
CLIC4Q9Y696 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLIC4Q9Y696 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLIC4Q9Y696 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.78■□□□□ 0.92
CLIC4Q9Y696 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLIC4Q9Y696 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.78■□□□□ 0.92
CLIC4Q9Y696 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.78■□□□□ 0.92
CLIC4Q9Y696 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CLIC4Q9Y696 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLIC4Q9Y696 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLIC4Q9Y696 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CLIC4Q9Y696 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CLIC4Q9Y696 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CLIC4Q9Y696 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.78■□□□□ 0.92
CLIC4Q9Y696 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLIC4Q9Y696 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLIC4Q9Y696 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.78■□□□□ 0.92
CLIC4Q9Y696 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.78■□□□□ 0.92
CLIC4Q9Y696 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.78■□□□□ 0.92
CLIC4Q9Y696 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.78■□□□□ 0.92
CLIC4Q9Y696 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.78■□□□□ 0.92
CLIC4Q9Y696 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLIC4Q9Y696 AC009065.1-201ENST00000564055 1225 ntBASIC20.78■□□□□ 0.92
CLIC4Q9Y696 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLIC4Q9Y696 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CLIC4Q9Y696 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
CLIC4Q9Y696 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLIC4Q9Y696 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLIC4Q9Y696 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLIC4Q9Y696 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLIC4Q9Y696 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLIC4Q9Y696 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CLIC4Q9Y696 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CLIC4Q9Y696 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLIC4Q9Y696 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLIC4Q9Y696 AC132938.6-201ENST00000623828 1655 ntBASIC20.77■□□□□ 0.92
CLIC4Q9Y696 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLIC4Q9Y696 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLIC4Q9Y696 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLIC4Q9Y696 AC006116.8-202ENST00000587620 1550 ntBASIC20.77■□□□□ 0.92
CLIC4Q9Y696 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLIC4Q9Y696 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLIC4Q9Y696 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLIC4Q9Y696 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLIC4Q9Y696 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.77■□□□□ 0.92
CLIC4Q9Y696 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.77■□□□□ 0.92
CLIC4Q9Y696 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLIC4Q9Y696 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLIC4Q9Y696 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.77■□□□□ 0.92
CLIC4Q9Y696 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.77■□□□□ 0.92
CLIC4Q9Y696 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLIC4Q9Y696 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms