Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.95■□□□□ 0.46
VTI1BQ9UEU0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VTI1BQ9UEU0 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VTI1BQ9UEU0 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.95■□□□□ 0.46
VTI1BQ9UEU0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VTI1BQ9UEU0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VTI1BQ9UEU0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
VTI1BQ9UEU0 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VTI1BQ9UEU0 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
VTI1BQ9UEU0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
VTI1BQ9UEU0 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
VTI1BQ9UEU0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VTI1BQ9UEU0 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
VTI1BQ9UEU0 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
VTI1BQ9UEU0 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VTI1BQ9UEU0 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.94■□□□□ 0.46
VTI1BQ9UEU0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VTI1BQ9UEU0 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
VTI1BQ9UEU0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
VTI1BQ9UEU0 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.94■□□□□ 0.46
VTI1BQ9UEU0 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
VTI1BQ9UEU0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
VTI1BQ9UEU0 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
VTI1BQ9UEU0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.94■□□□□ 0.46
VTI1BQ9UEU0 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
VTI1BQ9UEU0 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VTI1BQ9UEU0 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.94■□□□□ 0.46
VTI1BQ9UEU0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.94■□□□□ 0.46
VTI1BQ9UEU0 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VTI1BQ9UEU0 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.94■□□□□ 0.46
VTI1BQ9UEU0 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.94■□□□□ 0.46
VTI1BQ9UEU0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.94■□□□□ 0.46
VTI1BQ9UEU0 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.94■□□□□ 0.46
VTI1BQ9UEU0 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VTI1BQ9UEU0 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VTI1BQ9UEU0 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VTI1BQ9UEU0 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VTI1BQ9UEU0 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VTI1BQ9UEU0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.94■□□□□ 0.46
VTI1BQ9UEU0 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VTI1BQ9UEU0 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
VTI1BQ9UEU0 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VTI1BQ9UEU0 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VTI1BQ9UEU0 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VTI1BQ9UEU0 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VTI1BQ9UEU0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VTI1BQ9UEU0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VTI1BQ9UEU0 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VTI1BQ9UEU0 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VTI1BQ9UEU0 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
VTI1BQ9UEU0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
VTI1BQ9UEU0 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VTI1BQ9UEU0 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
VTI1BQ9UEU0 MIR564-202ENST00000385049 94 ntBASIC17.93■□□□□ 0.46
VTI1BQ9UEU0 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VTI1BQ9UEU0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.93■□□□□ 0.46
VTI1BQ9UEU0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.93■□□□□ 0.46
VTI1BQ9UEU0 TSPY15P-201ENST00000457163 923 ntBASIC17.93■□□□□ 0.46
VTI1BQ9UEU0 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.93■□□□□ 0.46
VTI1BQ9UEU0 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
VTI1BQ9UEU0 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VTI1BQ9UEU0 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VTI1BQ9UEU0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VTI1BQ9UEU0 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
VTI1BQ9UEU0 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
VTI1BQ9UEU0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VTI1BQ9UEU0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.92■□□□□ 0.46
VTI1BQ9UEU0 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
VTI1BQ9UEU0 PHGDH-209ENST00000641074 1780 ntBASIC17.92■□□□□ 0.46
VTI1BQ9UEU0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VTI1BQ9UEU0 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VTI1BQ9UEU0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.92■□□□□ 0.46
VTI1BQ9UEU0 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
VTI1BQ9UEU0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
VTI1BQ9UEU0 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VTI1BQ9UEU0 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.92■□□□□ 0.46
VTI1BQ9UEU0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.92■□□□□ 0.46
VTI1BQ9UEU0 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.92■□□□□ 0.46
VTI1BQ9UEU0 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.92■□□□□ 0.46
VTI1BQ9UEU0 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
VTI1BQ9UEU0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.92■□□□□ 0.46
VTI1BQ9UEU0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.92■□□□□ 0.46
VTI1BQ9UEU0 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.92■□□□□ 0.46
VTI1BQ9UEU0 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VTI1BQ9UEU0 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VTI1BQ9UEU0 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.92■□□□□ 0.46
VTI1BQ9UEU0 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VTI1BQ9UEU0 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VTI1BQ9UEU0 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VTI1BQ9UEU0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.91■□□□□ 0.46
VTI1BQ9UEU0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VTI1BQ9UEU0 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VTI1BQ9UEU0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.91■□□□□ 0.46
VTI1BQ9UEU0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.91■□□□□ 0.46
VTI1BQ9UEU0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.91■□□□□ 0.46
VTI1BQ9UEU0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
VTI1BQ9UEU0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VTI1BQ9UEU0 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.91■□□□□ 0.46
VTI1BQ9UEU0 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VTI1BQ9UEU0 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms