Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLN6Q9NWW5 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
CLN6Q9NWW5 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CLN6Q9NWW5 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.65■□□□□ 0.26
CLN6Q9NWW5 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLN6Q9NWW5 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLN6Q9NWW5 AC006116.8-202ENST00000587620 1550 ntBASIC16.65■□□□□ 0.26
CLN6Q9NWW5 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLN6Q9NWW5 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLN6Q9NWW5 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLN6Q9NWW5 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLN6Q9NWW5 AP000593.1-201ENST00000393668 712 ntBASIC16.65■□□□□ 0.26
CLN6Q9NWW5 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.65■□□□□ 0.26
CLN6Q9NWW5 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLN6Q9NWW5 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLN6Q9NWW5 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLN6Q9NWW5 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLN6Q9NWW5 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.65■□□□□ 0.26
CLN6Q9NWW5 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CLN6Q9NWW5 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLN6Q9NWW5 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.65■□□□□ 0.26
CLN6Q9NWW5 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLN6Q9NWW5 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.65■□□□□ 0.26
CLN6Q9NWW5 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CLN6Q9NWW5 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.65■□□□□ 0.26
CLN6Q9NWW5 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLN6Q9NWW5 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLN6Q9NWW5 AC141586.5-201ENST00000624546 2050 ntBASIC16.65■□□□□ 0.26
CLN6Q9NWW5 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLN6Q9NWW5 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CLN6Q9NWW5 AD000864.1-201ENST00000624076 2295 ntBASIC16.65■□□□□ 0.26
CLN6Q9NWW5 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CLN6Q9NWW5 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.64■□□□□ 0.26
CLN6Q9NWW5 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.64■□□□□ 0.25
CLN6Q9NWW5 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.64■□□□□ 0.25
CLN6Q9NWW5 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLN6Q9NWW5 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.64■□□□□ 0.25
CLN6Q9NWW5 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLN6Q9NWW5 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLN6Q9NWW5 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLN6Q9NWW5 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.64■□□□□ 0.25
CLN6Q9NWW5 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLN6Q9NWW5 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLN6Q9NWW5 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLN6Q9NWW5 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLN6Q9NWW5 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLN6Q9NWW5 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLN6Q9NWW5 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLN6Q9NWW5 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLN6Q9NWW5 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLN6Q9NWW5 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CLN6Q9NWW5 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLN6Q9NWW5 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CLN6Q9NWW5 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CLN6Q9NWW5 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLN6Q9NWW5 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.64■□□□□ 0.25
CLN6Q9NWW5 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLN6Q9NWW5 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
CLN6Q9NWW5 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.64■□□□□ 0.25
CLN6Q9NWW5 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLN6Q9NWW5 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.64■□□□□ 0.25
CLN6Q9NWW5 PHGDH-209ENST00000641074 1780 ntBASIC16.64■□□□□ 0.25
CLN6Q9NWW5 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.64■□□□□ 0.25
CLN6Q9NWW5 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.64■□□□□ 0.25
CLN6Q9NWW5 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLN6Q9NWW5 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLN6Q9NWW5 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLN6Q9NWW5 AL023806.1-201ENST00000603994 1649 ntBASIC16.63■□□□□ 0.25
CLN6Q9NWW5 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.63■□□□□ 0.25
CLN6Q9NWW5 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLN6Q9NWW5 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.63■□□□□ 0.25
CLN6Q9NWW5 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLN6Q9NWW5 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.63■□□□□ 0.25
CLN6Q9NWW5 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLN6Q9NWW5 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.63■□□□□ 0.25
CLN6Q9NWW5 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CLN6Q9NWW5 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CLN6Q9NWW5 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLN6Q9NWW5 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLN6Q9NWW5 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.63■□□□□ 0.25
CLN6Q9NWW5 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.63■□□□□ 0.25
CLN6Q9NWW5 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.63■□□□□ 0.25
CLN6Q9NWW5 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.63■□□□□ 0.25
CLN6Q9NWW5 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.63■□□□□ 0.25
CLN6Q9NWW5 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.63■□□□□ 0.25
CLN6Q9NWW5 AC008403.3-201ENST00000598924 454 ntBASIC16.63■□□□□ 0.25
CLN6Q9NWW5 MTDHP1-201ENST00000605323 784 ntBASIC16.63■□□□□ 0.25
CLN6Q9NWW5 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.63■□□□□ 0.25
CLN6Q9NWW5 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLN6Q9NWW5 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.63■□□□□ 0.25
CLN6Q9NWW5 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLN6Q9NWW5 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLN6Q9NWW5 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLN6Q9NWW5 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
CLN6Q9NWW5 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.63■□□□□ 0.25
CLN6Q9NWW5 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.63■□□□□ 0.25
CLN6Q9NWW5 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLN6Q9NWW5 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.63■□□□□ 0.25
CLN6Q9NWW5 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
CLN6Q9NWW5 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms