Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTPS2Q9NRF8 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTPS2Q9NRF8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
CTPS2Q9NRF8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.98■□□□□ 0.31
CTPS2Q9NRF8 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CTPS2Q9NRF8 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTPS2Q9NRF8 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTPS2Q9NRF8 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.98■□□□□ 0.31
CTPS2Q9NRF8 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
CTPS2Q9NRF8 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.98■□□□□ 0.31
CTPS2Q9NRF8 TSPY17P-201ENST00000450329 467 ntBASIC16.98■□□□□ 0.31
CTPS2Q9NRF8 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CTPS2Q9NRF8 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.98■□□□□ 0.31
CTPS2Q9NRF8 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CTPS2Q9NRF8 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.98■□□□□ 0.31
CTPS2Q9NRF8 AP003041.3-201ENST00000527151 707 ntBASIC16.98■□□□□ 0.31
CTPS2Q9NRF8 BX088651.1-201ENST00000540551 451 ntBASIC16.98■□□□□ 0.31
CTPS2Q9NRF8 NAPSB-206ENST00000562112 1266 ntBASIC16.98■□□□□ 0.31
CTPS2Q9NRF8 AL353719.1-201ENST00000566847 864 ntBASIC16.98■□□□□ 0.31
CTPS2Q9NRF8 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.98■□□□□ 0.31
CTPS2Q9NRF8 MIR4674-201ENST00000582457 87 ntBASIC16.98■□□□□ 0.31
CTPS2Q9NRF8 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.98■□□□□ 0.31
CTPS2Q9NRF8 AC116562.4-202ENST00000641738 218 ntBASIC16.98■□□□□ 0.31
CTPS2Q9NRF8 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CTPS2Q9NRF8 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTPS2Q9NRF8 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTPS2Q9NRF8 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.98■□□□□ 0.31
CTPS2Q9NRF8 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CTPS2Q9NRF8 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CTPS2Q9NRF8 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 AC092338.2-201ENST00000568827 1415 ntBASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 TSPY14P-201ENST00000303979 915 ntBASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 MIR564-202ENST00000385049 94 ntBASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 AC010947.1-201ENST00000623454 693 ntBASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.97■□□□□ 0.31
CTPS2Q9NRF8 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTPS2Q9NRF8 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTPS2Q9NRF8 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CTPS2Q9NRF8 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTPS2Q9NRF8 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CTPS2Q9NRF8 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTPS2Q9NRF8 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTPS2Q9NRF8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTPS2Q9NRF8 INGX-201ENST00000359239 846 ntBASIC16.96■□□□□ 0.31
CTPS2Q9NRF8 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.96■□□□□ 0.31
CTPS2Q9NRF8 AC007663.1-201ENST00000438948 1240 ntBASIC16.96■□□□□ 0.31
CTPS2Q9NRF8 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.96■□□□□ 0.31
CTPS2Q9NRF8 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.96■□□□□ 0.31
CTPS2Q9NRF8 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.96■□□□□ 0.31
CTPS2Q9NRF8 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.96■□□□□ 0.31
CTPS2Q9NRF8 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.96■□□□□ 0.31
CTPS2Q9NRF8 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CTPS2Q9NRF8 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTPS2Q9NRF8 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CTPS2Q9NRF8 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTPS2Q9NRF8 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTPS2Q9NRF8 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
CTPS2Q9NRF8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CTPS2Q9NRF8 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
CTPS2Q9NRF8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CTPS2Q9NRF8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.96■□□□□ 0.3
CTPS2Q9NRF8 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
CTPS2Q9NRF8 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CTPS2Q9NRF8 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTPS2Q9NRF8 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms