Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CYSTM1Q9H1C7 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CYSTM1Q9H1C7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC10.55□□□□□ -0.72
CYSTM1Q9H1C7 HR-201ENST00000312841 5351 ntTSL 5 BASIC10.55□□□□□ -0.72
CYSTM1Q9H1C7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CYSTM1Q9H1C7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CYSTM1Q9H1C7 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CYSTM1Q9H1C7 AC009090.5-201ENST00000624886 2285 ntBASIC10.55□□□□□ -0.72
CYSTM1Q9H1C7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
CYSTM1Q9H1C7 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
CYSTM1Q9H1C7 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
CYSTM1Q9H1C7 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CYSTM1Q9H1C7 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CYSTM1Q9H1C7 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
CYSTM1Q9H1C7 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 REST-206ENST00000612429 1376 ntTSL 5 BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 REST-207ENST00000616975 1370 ntTSL 5 BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 AC041040.2-201ENST00000622926 2899 ntBASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 Z82170.1-201ENST00000625081 3192 ntBASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 AC117489.1-201ENST00000625169 3217 ntBASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CYSTM1Q9H1C7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 AC092364.2-201ENST00000596710 2692 ntBASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms