Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.82■□□□□ 0.6
FOXP3Q9BZS1 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.82■□□□□ 0.6
FOXP3Q9BZS1 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.82■□□□□ 0.6
FOXP3Q9BZS1 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXP3Q9BZS1 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FOXP3Q9BZS1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXP3Q9BZS1 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.82■□□□□ 0.6
FOXP3Q9BZS1 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXP3Q9BZS1 LIN28AP1-201ENST00000429574 405 ntBASIC18.82■□□□□ 0.6
FOXP3Q9BZS1 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FOXP3Q9BZS1 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
FOXP3Q9BZS1 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXP3Q9BZS1 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
FOXP3Q9BZS1 AC011298.2-201ENST00000617989 482 ntBASIC18.82■□□□□ 0.6
FOXP3Q9BZS1 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.82■□□□□ 0.6
FOXP3Q9BZS1 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.82■□□□□ 0.6
FOXP3Q9BZS1 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
FOXP3Q9BZS1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FOXP3Q9BZS1 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXP3Q9BZS1 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXP3Q9BZS1 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXP3Q9BZS1 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.82■□□□□ 0.6
FOXP3Q9BZS1 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FOXP3Q9BZS1 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXP3Q9BZS1 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FOXP3Q9BZS1 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FOXP3Q9BZS1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.81■□□□□ 0.6
FOXP3Q9BZS1 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXP3Q9BZS1 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
FOXP3Q9BZS1 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXP3Q9BZS1 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXP3Q9BZS1 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FOXP3Q9BZS1 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
FOXP3Q9BZS1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.81■□□□□ 0.6
FOXP3Q9BZS1 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.81■□□□□ 0.6
FOXP3Q9BZS1 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXP3Q9BZS1 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.81■□□□□ 0.6
FOXP3Q9BZS1 ATP5G1P1-201ENST00000448724 379 ntBASIC18.81■□□□□ 0.6
FOXP3Q9BZS1 AC104076.2-201ENST00000448912 469 ntBASIC18.81■□□□□ 0.6
FOXP3Q9BZS1 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.81■□□□□ 0.6
FOXP3Q9BZS1 DUX4L26-201ENST00000489078 1255 ntBASIC18.81■□□□□ 0.6
FOXP3Q9BZS1 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.81■□□□□ 0.6
FOXP3Q9BZS1 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FOXP3Q9BZS1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FOXP3Q9BZS1 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FOXP3Q9BZS1 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FOXP3Q9BZS1 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.81■□□□□ 0.6
FOXP3Q9BZS1 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.81■□□□□ 0.6
FOXP3Q9BZS1 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.81■□□□□ 0.6
FOXP3Q9BZS1 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.81■□□□□ 0.6
FOXP3Q9BZS1 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
FOXP3Q9BZS1 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXP3Q9BZS1 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXP3Q9BZS1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXP3Q9BZS1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.81■□□□□ 0.6
FOXP3Q9BZS1 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXP3Q9BZS1 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
FOXP3Q9BZS1 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXP3Q9BZS1 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
FOXP3Q9BZS1 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXP3Q9BZS1 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
FOXP3Q9BZS1 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FOXP3Q9BZS1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXP3Q9BZS1 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXP3Q9BZS1 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FOXP3Q9BZS1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
FOXP3Q9BZS1 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.8■□□□□ 0.6
FOXP3Q9BZS1 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.8■□□□□ 0.6
FOXP3Q9BZS1 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXP3Q9BZS1 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
FOXP3Q9BZS1 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
FOXP3Q9BZS1 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
FOXP3Q9BZS1 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.8■□□□□ 0.6
FOXP3Q9BZS1 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.8■□□□□ 0.6
FOXP3Q9BZS1 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FOXP3Q9BZS1 SLC25A1P4-201ENST00000567977 778 ntBASIC18.8■□□□□ 0.6
FOXP3Q9BZS1 AP005242.2-201ENST00000580065 1175 ntBASIC18.8■□□□□ 0.6
FOXP3Q9BZS1 NTF6B-201ENST00000591913 560 ntBASIC18.8■□□□□ 0.6
FOXP3Q9BZS1 DGCR10-201ENST00000609839 495 ntBASIC18.8■□□□□ 0.6
FOXP3Q9BZS1 AC130371.2-201ENST00000619443 611 ntBASIC18.8■□□□□ 0.6
FOXP3Q9BZS1 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.8■□□□□ 0.6
FOXP3Q9BZS1 AC034236.2-201ENST00000606662 1610 ntBASIC18.8■□□□□ 0.6
FOXP3Q9BZS1 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FOXP3Q9BZS1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.8■□□□□ 0.6
FOXP3Q9BZS1 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXP3Q9BZS1 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXP3Q9BZS1 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FOXP3Q9BZS1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FOXP3Q9BZS1 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.8■□□□□ 0.6
FOXP3Q9BZS1 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXP3Q9BZS1 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.79■□□□□ 0.6
FOXP3Q9BZS1 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXP3Q9BZS1 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
FOXP3Q9BZS1 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXP3Q9BZS1 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXP3Q9BZS1 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXP3Q9BZS1 PHGDH-209ENST00000641074 1780 ntBASIC18.79■□□□□ 0.6
FOXP3Q9BZS1 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXP3Q9BZS1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
FOXP3Q9BZS1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms