Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 SPDYE15P-201ENST00000424157 909 ntBASIC21.57■■□□□ 1.04
NEK1Q96PY6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.57■■□□□ 1.04
NEK1Q96PY6 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NEK1Q96PY6 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
NEK1Q96PY6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.57■■□□□ 1.04
NEK1Q96PY6 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NEK1Q96PY6 AC006011.2-201ENST00000621313 1158 ntBASIC21.57■■□□□ 1.04
NEK1Q96PY6 AC079602.3-201ENST00000623931 403 ntBASIC21.57■■□□□ 1.04
NEK1Q96PY6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NEK1Q96PY6 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NEK1Q96PY6 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NEK1Q96PY6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC21.57■■□□□ 1.04
NEK1Q96PY6 AC008764.6-201ENST00000595909 2069 ntBASIC21.57■■□□□ 1.04
NEK1Q96PY6 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NEK1Q96PY6 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NEK1Q96PY6 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NEK1Q96PY6 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.57■■□□□ 1.04
NEK1Q96PY6 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NEK1Q96PY6 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
NEK1Q96PY6 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
NEK1Q96PY6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
NEK1Q96PY6 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
NEK1Q96PY6 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NEK1Q96PY6 AC068880.1-201ENST00000507289 2297 ntBASIC21.57■■□□□ 1.04
NEK1Q96PY6 AP000997.3-201ENST00000623333 2250 ntBASIC21.57■■□□□ 1.04
NEK1Q96PY6 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC21.56■■□□□ 1.04
NEK1Q96PY6 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NEK1Q96PY6 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC21.56■■□□□ 1.04
NEK1Q96PY6 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NEK1Q96PY6 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NEK1Q96PY6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NEK1Q96PY6 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NEK1Q96PY6 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
NEK1Q96PY6 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NEK1Q96PY6 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NEK1Q96PY6 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NEK1Q96PY6 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
NEK1Q96PY6 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.56■■□□□ 1.04
NEK1Q96PY6 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NEK1Q96PY6 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NEK1Q96PY6 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NEK1Q96PY6 RCN1P1-201ENST00000400413 996 ntBASIC21.56■■□□□ 1.04
NEK1Q96PY6 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NEK1Q96PY6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.56■■□□□ 1.04
NEK1Q96PY6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.56■■□□□ 1.04
NEK1Q96PY6 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NEK1Q96PY6 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
NEK1Q96PY6 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NEK1Q96PY6 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NEK1Q96PY6 STK4-201ENST00000372801 2038 ntTSL 2 BASIC21.56■■□□□ 1.04
NEK1Q96PY6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NEK1Q96PY6 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NEK1Q96PY6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NEK1Q96PY6 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NEK1Q96PY6 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NEK1Q96PY6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NEK1Q96PY6 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.55■■□□□ 1.04
NEK1Q96PY6 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
NEK1Q96PY6 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NEK1Q96PY6 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
NEK1Q96PY6 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NEK1Q96PY6 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.55■■□□□ 1.04
NEK1Q96PY6 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
NEK1Q96PY6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NEK1Q96PY6 STARP1-201ENST00000397973 869 ntBASIC21.55■■□□□ 1.04
NEK1Q96PY6 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.55■■□□□ 1.04
NEK1Q96PY6 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.55■■□□□ 1.04
NEK1Q96PY6 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.55■■□□□ 1.04
NEK1Q96PY6 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.55■■□□□ 1.04
NEK1Q96PY6 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
NEK1Q96PY6 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
NEK1Q96PY6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NEK1Q96PY6 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
NEK1Q96PY6 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NEK1Q96PY6 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NEK1Q96PY6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NEK1Q96PY6 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NEK1Q96PY6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NEK1Q96PY6 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
NEK1Q96PY6 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NEK1Q96PY6 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
NEK1Q96PY6 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.55■■□□□ 1.04
NEK1Q96PY6 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
NEK1Q96PY6 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NEK1Q96PY6 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.54■■□□□ 1.04
NEK1Q96PY6 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.54■■□□□ 1.04
NEK1Q96PY6 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
NEK1Q96PY6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NEK1Q96PY6 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NEK1Q96PY6 TSPY5P-201ENST00000426936 936 ntBASIC21.54■■□□□ 1.04
NEK1Q96PY6 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.54■■□□□ 1.04
NEK1Q96PY6 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.54■■□□□ 1.04
NEK1Q96PY6 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.54■■□□□ 1.04
NEK1Q96PY6 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NEK1Q96PY6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.54■■□□□ 1.04
NEK1Q96PY6 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.54■■□□□ 1.04
NEK1Q96PY6 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NEK1Q96PY6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.54■■□□□ 1.04
NEK1Q96PY6 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
NEK1Q96PY6 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms