Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYNGAP1Q96PV0 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYNGAP1Q96PV0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SYNGAP1Q96PV0 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYNGAP1Q96PV0 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYNGAP1Q96PV0 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYNGAP1Q96PV0 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.66■□□□□ 0.9
SYNGAP1Q96PV0 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SYNGAP1Q96PV0 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYNGAP1Q96PV0 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.66■□□□□ 0.9
SYNGAP1Q96PV0 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.66■□□□□ 0.9
SYNGAP1Q96PV0 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.66■□□□□ 0.9
SYNGAP1Q96PV0 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.66■□□□□ 0.9
SYNGAP1Q96PV0 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYNGAP1Q96PV0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.66■□□□□ 0.9
SYNGAP1Q96PV0 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SYNGAP1Q96PV0 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.66■□□□□ 0.9
SYNGAP1Q96PV0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYNGAP1Q96PV0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYNGAP1Q96PV0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 IL9RP2-201ENST00000423948 1312 ntBASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYNGAP1Q96PV0 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SYNGAP1Q96PV0 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SYNGAP1Q96PV0 AC004408.2-201ENST00000623613 2777 ntBASIC20.64■□□□□ 0.9
SYNGAP1Q96PV0 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
SYNGAP1Q96PV0 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYNGAP1Q96PV0 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
SYNGAP1Q96PV0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
SYNGAP1Q96PV0 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SYNGAP1Q96PV0 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYNGAP1Q96PV0 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SYNGAP1Q96PV0 PMS2P1-201ENST00000431037 1228 ntBASIC20.64■□□□□ 0.89
SYNGAP1Q96PV0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYNGAP1Q96PV0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.64■□□□□ 0.89
SYNGAP1Q96PV0 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SYNGAP1Q96PV0 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SYNGAP1Q96PV0 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.64■□□□□ 0.89
SYNGAP1Q96PV0 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYNGAP1Q96PV0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYNGAP1Q96PV0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.64■□□□□ 0.89
SYNGAP1Q96PV0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYNGAP1Q96PV0 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.64■□□□□ 0.89
SYNGAP1Q96PV0 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
SYNGAP1Q96PV0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
SYNGAP1Q96PV0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SYNGAP1Q96PV0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SYNGAP1Q96PV0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SYNGAP1Q96PV0 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.63■□□□□ 0.89
SYNGAP1Q96PV0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.63■□□□□ 0.89
SYNGAP1Q96PV0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SYNGAP1Q96PV0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.63■□□□□ 0.89
SYNGAP1Q96PV0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.63■□□□□ 0.89
SYNGAP1Q96PV0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SYNGAP1Q96PV0 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SYNGAP1Q96PV0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SYNGAP1Q96PV0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SYNGAP1Q96PV0 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SYNGAP1Q96PV0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.63■□□□□ 0.89
SYNGAP1Q96PV0 AL031284.1-201ENST00000419297 478 ntBASIC20.63■□□□□ 0.89
SYNGAP1Q96PV0 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.63■□□□□ 0.89
SYNGAP1Q96PV0 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SYNGAP1Q96PV0 AF186996.4-201ENST00000467186 377 ntBASIC20.63■□□□□ 0.89
SYNGAP1Q96PV0 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.63■□□□□ 0.89
SYNGAP1Q96PV0 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms