Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF139Q8WU17 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF139Q8WU17 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF139Q8WU17 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.13■□□□□ 0.65
RNF139Q8WU17 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF139Q8WU17 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
RNF139Q8WU17 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF139Q8WU17 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF139Q8WU17 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.12■□□□□ 0.65
RNF139Q8WU17 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF139Q8WU17 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.12■□□□□ 0.65
RNF139Q8WU17 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF139Q8WU17 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
RNF139Q8WU17 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF139Q8WU17 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
RNF139Q8WU17 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.12■□□□□ 0.65
RNF139Q8WU17 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.12■□□□□ 0.65
RNF139Q8WU17 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.12■□□□□ 0.65
RNF139Q8WU17 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF139Q8WU17 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.12■□□□□ 0.65
RNF139Q8WU17 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF139Q8WU17 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF139Q8WU17 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF139Q8WU17 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF139Q8WU17 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF139Q8WU17 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF139Q8WU17 AP003733.1-201ENST00000491725 852 ntBASIC19.12■□□□□ 0.65
RNF139Q8WU17 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.12■□□□□ 0.65
RNF139Q8WU17 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.12■□□□□ 0.65
RNF139Q8WU17 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.12■□□□□ 0.65
RNF139Q8WU17 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.12■□□□□ 0.65
RNF139Q8WU17 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF139Q8WU17 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF139Q8WU17 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF139Q8WU17 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF139Q8WU17 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.12■□□□□ 0.65
RNF139Q8WU17 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF139Q8WU17 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.12■□□□□ 0.65
RNF139Q8WU17 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF139Q8WU17 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF139Q8WU17 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.11■□□□□ 0.65
RNF139Q8WU17 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF139Q8WU17 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF139Q8WU17 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF139Q8WU17 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF139Q8WU17 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
RNF139Q8WU17 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.11■□□□□ 0.65
RNF139Q8WU17 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF139Q8WU17 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF139Q8WU17 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF139Q8WU17 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF139Q8WU17 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF139Q8WU17 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RNF139Q8WU17 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF139Q8WU17 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF139Q8WU17 UPK3BP1-201ENST00000428678 509 ntBASIC19.11■□□□□ 0.65
RNF139Q8WU17 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.11■□□□□ 0.65
RNF139Q8WU17 AC011498.5-201ENST00000592027 486 ntBASIC19.11■□□□□ 0.65
RNF139Q8WU17 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.11■□□□□ 0.65
RNF139Q8WU17 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF139Q8WU17 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF139Q8WU17 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF139Q8WU17 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.11■□□□□ 0.65
RNF139Q8WU17 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF139Q8WU17 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF139Q8WU17 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF139Q8WU17 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.11■□□□□ 0.65
RNF139Q8WU17 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF139Q8WU17 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF139Q8WU17 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF139Q8WU17 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF139Q8WU17 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF139Q8WU17 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF139Q8WU17 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF139Q8WU17 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF139Q8WU17 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF139Q8WU17 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
RNF139Q8WU17 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RNF139Q8WU17 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.1■□□□□ 0.65
RNF139Q8WU17 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF139Q8WU17 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF139Q8WU17 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
RNF139Q8WU17 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF139Q8WU17 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF139Q8WU17 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RNF139Q8WU17 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.1■□□□□ 0.65
RNF139Q8WU17 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.1■□□□□ 0.65
RNF139Q8WU17 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.1■□□□□ 0.65
RNF139Q8WU17 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF139Q8WU17 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF139Q8WU17 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF139Q8WU17 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF139Q8WU17 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF139Q8WU17 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF139Q8WU17 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF139Q8WU17 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF139Q8WU17 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF139Q8WU17 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RNF139Q8WU17 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF139Q8WU17 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms