Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
HMGCLL1Q8TB92 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.89■□□□□ 0.45
HMGCLL1Q8TB92 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.89■□□□□ 0.45
HMGCLL1Q8TB92 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCLL1Q8TB92 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.89■□□□□ 0.45
HMGCLL1Q8TB92 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.89■□□□□ 0.45
HMGCLL1Q8TB92 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCLL1Q8TB92 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.88■□□□□ 0.45
HMGCLL1Q8TB92 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCLL1Q8TB92 AL163051.1-201ENST00000569214 1512 ntBASIC17.88■□□□□ 0.45
HMGCLL1Q8TB92 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.88■□□□□ 0.45
HMGCLL1Q8TB92 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCLL1Q8TB92 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.88■□□□□ 0.45
HMGCLL1Q8TB92 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCLL1Q8TB92 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCLL1Q8TB92 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCLL1Q8TB92 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCLL1Q8TB92 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCLL1Q8TB92 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
HMGCLL1Q8TB92 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCLL1Q8TB92 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCLL1Q8TB92 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
HMGCLL1Q8TB92 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.88■□□□□ 0.45
HMGCLL1Q8TB92 REXO1L9P-201ENST00000604264 2108 ntBASIC17.88■□□□□ 0.45
HMGCLL1Q8TB92 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCLL1Q8TB92 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCLL1Q8TB92 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.88■□□□□ 0.45
HMGCLL1Q8TB92 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCLL1Q8TB92 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCLL1Q8TB92 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCLL1Q8TB92 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
HMGCLL1Q8TB92 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCLL1Q8TB92 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCLL1Q8TB92 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
HMGCLL1Q8TB92 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCLL1Q8TB92 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
HMGCLL1Q8TB92 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCLL1Q8TB92 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
HMGCLL1Q8TB92 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCLL1Q8TB92 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.88■□□□□ 0.45
HMGCLL1Q8TB92 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCLL1Q8TB92 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCLL1Q8TB92 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
HMGCLL1Q8TB92 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCLL1Q8TB92 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCLL1Q8TB92 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCLL1Q8TB92 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCLL1Q8TB92 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCLL1Q8TB92 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCLL1Q8TB92 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCLL1Q8TB92 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.87■□□□□ 0.45
HMGCLL1Q8TB92 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCLL1Q8TB92 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.87■□□□□ 0.45
HMGCLL1Q8TB92 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HMGCLL1Q8TB92 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCLL1Q8TB92 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCLL1Q8TB92 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
HMGCLL1Q8TB92 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.87■□□□□ 0.45
HMGCLL1Q8TB92 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
HMGCLL1Q8TB92 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCLL1Q8TB92 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCLL1Q8TB92 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
HMGCLL1Q8TB92 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCLL1Q8TB92 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCLL1Q8TB92 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HMGCLL1Q8TB92 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCLL1Q8TB92 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCLL1Q8TB92 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCLL1Q8TB92 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
HMGCLL1Q8TB92 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCLL1Q8TB92 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.86■□□□□ 0.45
HMGCLL1Q8TB92 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCLL1Q8TB92 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
HMGCLL1Q8TB92 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCLL1Q8TB92 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.86■□□□□ 0.45
HMGCLL1Q8TB92 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
HMGCLL1Q8TB92 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCLL1Q8TB92 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCLL1Q8TB92 MIR149-201ENST00000384879 89 ntBASIC17.86■□□□□ 0.45
HMGCLL1Q8TB92 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCLL1Q8TB92 SLC25A6P5-201ENST00000435663 894 ntBASIC17.86■□□□□ 0.45
HMGCLL1Q8TB92 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCLL1Q8TB92 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCLL1Q8TB92 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCLL1Q8TB92 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.86■□□□□ 0.45
HMGCLL1Q8TB92 AC022616.7-201ENST00000525383 220 ntBASIC17.86■□□□□ 0.45
HMGCLL1Q8TB92 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.86■□□□□ 0.45
HMGCLL1Q8TB92 LINC01238-205ENST00000567549 1107 ntBASIC17.86■□□□□ 0.45
HMGCLL1Q8TB92 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
HMGCLL1Q8TB92 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCLL1Q8TB92 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.86■□□□□ 0.45
HMGCLL1Q8TB92 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.86■□□□□ 0.45
HMGCLL1Q8TB92 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
HMGCLL1Q8TB92 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCLL1Q8TB92 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.86■□□□□ 0.45
HMGCLL1Q8TB92 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCLL1Q8TB92 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
HMGCLL1Q8TB92 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.86■□□□□ 0.45
HMGCLL1Q8TB92 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.86■□□□□ 0.45
HMGCLL1Q8TB92 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms