Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM35BQ8NCS4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM35BQ8NCS4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.31■□□□□ 0.68
TMEM35BQ8NCS4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM35BQ8NCS4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.31■□□□□ 0.68
TMEM35BQ8NCS4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
TMEM35BQ8NCS4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.31■□□□□ 0.68
TMEM35BQ8NCS4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM35BQ8NCS4 AC093010.1-201ENST00000473625 1624 ntBASIC19.31■□□□□ 0.68
TMEM35BQ8NCS4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM35BQ8NCS4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM35BQ8NCS4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM35BQ8NCS4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM35BQ8NCS4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.31■□□□□ 0.68
TMEM35BQ8NCS4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TMEM35BQ8NCS4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM35BQ8NCS4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM35BQ8NCS4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM35BQ8NCS4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.3■□□□□ 0.68
TMEM35BQ8NCS4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM35BQ8NCS4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM35BQ8NCS4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM35BQ8NCS4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM35BQ8NCS4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.3■□□□□ 0.68
TMEM35BQ8NCS4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
TMEM35BQ8NCS4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
TMEM35BQ8NCS4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
TMEM35BQ8NCS4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM35BQ8NCS4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TMEM35BQ8NCS4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.3■□□□□ 0.68
TMEM35BQ8NCS4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.3■□□□□ 0.68
TMEM35BQ8NCS4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM35BQ8NCS4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
TMEM35BQ8NCS4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM35BQ8NCS4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM35BQ8NCS4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM35BQ8NCS4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.3■□□□□ 0.68
TMEM35BQ8NCS4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM35BQ8NCS4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.3■□□□□ 0.68
TMEM35BQ8NCS4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM35BQ8NCS4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM35BQ8NCS4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM35BQ8NCS4 FLJ13224-201ENST00000313737 1514 ntBASIC19.3■□□□□ 0.68
TMEM35BQ8NCS4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.3■□□□□ 0.68
TMEM35BQ8NCS4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.3■□□□□ 0.68
TMEM35BQ8NCS4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM35BQ8NCS4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.29■□□□□ 0.68
TMEM35BQ8NCS4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM35BQ8NCS4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
TMEM35BQ8NCS4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM35BQ8NCS4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM35BQ8NCS4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM35BQ8NCS4 STARP1-201ENST00000397973 869 ntBASIC19.29■□□□□ 0.68
TMEM35BQ8NCS4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.29■□□□□ 0.68
TMEM35BQ8NCS4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.29■□□□□ 0.68
TMEM35BQ8NCS4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM35BQ8NCS4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM35BQ8NCS4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM35BQ8NCS4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.29■□□□□ 0.68
TMEM35BQ8NCS4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM35BQ8NCS4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM35BQ8NCS4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.29■□□□□ 0.68
TMEM35BQ8NCS4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM35BQ8NCS4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.29■□□□□ 0.68
TMEM35BQ8NCS4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM35BQ8NCS4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM35BQ8NCS4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM35BQ8NCS4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM35BQ8NCS4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM35BQ8NCS4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM35BQ8NCS4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM35BQ8NCS4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM35BQ8NCS4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM35BQ8NCS4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.28■□□□□ 0.68
TMEM35BQ8NCS4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.28■□□□□ 0.68
TMEM35BQ8NCS4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM35BQ8NCS4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM35BQ8NCS4 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM35BQ8NCS4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM35BQ8NCS4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM35BQ8NCS4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM35BQ8NCS4 RNF152P1-201ENST00000397754 604 ntBASIC19.28■□□□□ 0.68
TMEM35BQ8NCS4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM35BQ8NCS4 TSPY5P-201ENST00000426936 936 ntBASIC19.28■□□□□ 0.68
TMEM35BQ8NCS4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM35BQ8NCS4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.28■□□□□ 0.68
TMEM35BQ8NCS4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.28■□□□□ 0.68
TMEM35BQ8NCS4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.28■□□□□ 0.68
TMEM35BQ8NCS4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.28■□□□□ 0.68
TMEM35BQ8NCS4 AC006011.2-201ENST00000621313 1158 ntBASIC19.28■□□□□ 0.68
TMEM35BQ8NCS4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM35BQ8NCS4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM35BQ8NCS4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM35BQ8NCS4 AC018470.1-201ENST00000624790 3129 ntBASIC19.28■□□□□ 0.68
TMEM35BQ8NCS4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM35BQ8NCS4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM35BQ8NCS4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM35BQ8NCS4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM35BQ8NCS4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM35BQ8NCS4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms