Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC25.77■■□□□ 1.72
UBR1Q8IWV7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
UBR1Q8IWV7 CRYGEP-201ENST00000412192 528 ntBASIC25.77■■□□□ 1.72
UBR1Q8IWV7 AC096633.1-201ENST00000422446 749 ntBASIC25.77■■□□□ 1.72
UBR1Q8IWV7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC25.76■■□□□ 1.72
UBR1Q8IWV7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
UBR1Q8IWV7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC25.76■■□□□ 1.71
UBR1Q8IWV7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
UBR1Q8IWV7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
UBR1Q8IWV7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
UBR1Q8IWV7 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
UBR1Q8IWV7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
UBR1Q8IWV7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
UBR1Q8IWV7 AC122714.2-201ENST00000502787 707 ntBASIC25.76■■□□□ 1.71
UBR1Q8IWV7 AP000344.2-201ENST00000512987 629 ntBASIC25.76■■□□□ 1.71
UBR1Q8IWV7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC25.76■■□□□ 1.71
UBR1Q8IWV7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC25.76■■□□□ 1.71
UBR1Q8IWV7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
UBR1Q8IWV7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
UBR1Q8IWV7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
UBR1Q8IWV7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
UBR1Q8IWV7 AC004817.3-201ENST00000602957 2129 ntBASIC25.75■■□□□ 1.71
UBR1Q8IWV7 AL158211.5-201ENST00000623583 2518 ntBASIC25.75■■□□□ 1.71
UBR1Q8IWV7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
UBR1Q8IWV7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
UBR1Q8IWV7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC25.75■■□□□ 1.71
UBR1Q8IWV7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
UBR1Q8IWV7 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
UBR1Q8IWV7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC25.75■■□□□ 1.71
UBR1Q8IWV7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
UBR1Q8IWV7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
UBR1Q8IWV7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC25.75■■□□□ 1.71
UBR1Q8IWV7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
UBR1Q8IWV7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
UBR1Q8IWV7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC25.74■■□□□ 1.71
UBR1Q8IWV7 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC25.74■■□□□ 1.71
UBR1Q8IWV7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC25.74■■□□□ 1.71
UBR1Q8IWV7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC25.74■■□□□ 1.71
UBR1Q8IWV7 MIR4751-201ENST00000578027 74 ntBASIC25.74■■□□□ 1.71
UBR1Q8IWV7 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC25.74■■□□□ 1.71
UBR1Q8IWV7 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC25.74■■□□□ 1.71
UBR1Q8IWV7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
UBR1Q8IWV7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC25.74■■□□□ 1.71
UBR1Q8IWV7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
UBR1Q8IWV7 AC006504.4-201ENST00000592118 1568 ntBASIC25.74■■□□□ 1.71
UBR1Q8IWV7 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
UBR1Q8IWV7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
UBR1Q8IWV7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
UBR1Q8IWV7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
UBR1Q8IWV7 AL499627.1-201ENST00000569373 2188 ntBASIC25.74■■□□□ 1.71
UBR1Q8IWV7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC25.74■■□□□ 1.71
UBR1Q8IWV7 IGLL3P-201ENST00000412472 434 ntBASIC25.74■■□□□ 1.71
UBR1Q8IWV7 SLC4A1APP2-201ENST00000424054 1259 ntBASIC25.74■■□□□ 1.71
UBR1Q8IWV7 PRYP5-201ENST00000451909 266 ntBASIC25.74■■□□□ 1.71
UBR1Q8IWV7 LHX6-205ENST00000464484 666 ntTSL 2 BASIC25.74■■□□□ 1.71
UBR1Q8IWV7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC25.74■■□□□ 1.71
UBR1Q8IWV7 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC25.74■■□□□ 1.71
UBR1Q8IWV7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC25.74■■□□□ 1.71
UBR1Q8IWV7 AC106028.4-201ENST00000614509 607 ntBASIC25.74■■□□□ 1.71
UBR1Q8IWV7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
UBR1Q8IWV7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
UBR1Q8IWV7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC25.73■■□□□ 1.71
UBR1Q8IWV7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
UBR1Q8IWV7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
UBR1Q8IWV7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
UBR1Q8IWV7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC25.73■■□□□ 1.71
UBR1Q8IWV7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
UBR1Q8IWV7 NCF1C-201ENST00000438382 1427 ntBASIC25.73■■□□□ 1.71
UBR1Q8IWV7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
UBR1Q8IWV7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
UBR1Q8IWV7 CD82-202ENST00000342935 967 ntTSL 5 BASIC25.73■■□□□ 1.71
UBR1Q8IWV7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
UBR1Q8IWV7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
UBR1Q8IWV7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC25.73■■□□□ 1.71
UBR1Q8IWV7 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
UBR1Q8IWV7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC25.73■■□□□ 1.71
UBR1Q8IWV7 PDPK2P-202ENST00000562415 1191 ntBASIC25.73■■□□□ 1.71
UBR1Q8IWV7 AC010507.1-201ENST00000633895 436 ntBASIC25.73■■□□□ 1.71
UBR1Q8IWV7 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC25.73■■□□□ 1.71
UBR1Q8IWV7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC25.73■■□□□ 1.71
UBR1Q8IWV7 AC132938.6-201ENST00000623828 1655 ntBASIC25.73■■□□□ 1.71
UBR1Q8IWV7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC25.73■■□□□ 1.71
UBR1Q8IWV7 AL161938.1-201ENST00000569833 2180 ntBASIC25.73■■□□□ 1.71
UBR1Q8IWV7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC25.72■■□□□ 1.71
UBR1Q8IWV7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC25.72■■□□□ 1.71
UBR1Q8IWV7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
UBR1Q8IWV7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
UBR1Q8IWV7 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC25.72■■□□□ 1.71
UBR1Q8IWV7 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
UBR1Q8IWV7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC25.72■■□□□ 1.71
UBR1Q8IWV7 WDR53-203ENST00000429115 683 ntTSL 2 BASIC25.72■■□□□ 1.71
UBR1Q8IWV7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC25.72■■□□□ 1.71
UBR1Q8IWV7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
UBR1Q8IWV7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
UBR1Q8IWV7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
UBR1Q8IWV7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC25.72■■□□□ 1.71
UBR1Q8IWV7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
UBR1Q8IWV7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
UBR1Q8IWV7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC25.72■■□□□ 1.71
UBR1Q8IWV7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms