Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VPS13CQ709C8 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.12■□□□□ 0.01
VPS13CQ709C8 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.12■□□□□ 0.01
VPS13CQ709C8 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.12■□□□□ 0.01
VPS13CQ709C8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC15.12■□□□□ 0.01
VPS13CQ709C8 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VPS13CQ709C8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VPS13CQ709C8 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
VPS13CQ709C8 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC15.11■□□□□ 0.01
VPS13CQ709C8 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.11■□□□□ 0.01
VPS13CQ709C8 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VPS13CQ709C8 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VPS13CQ709C8 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC15.11■□□□□ 0.01
VPS13CQ709C8 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.11■□□□□ 0.01
VPS13CQ709C8 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
VPS13CQ709C8 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.11■□□□□ 0.01
VPS13CQ709C8 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.11■□□□□ 0.01
VPS13CQ709C8 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.11■□□□□ 0.01
VPS13CQ709C8 AC113404.2-201ENST00000507884 177 ntBASIC15.11■□□□□ 0.01
VPS13CQ709C8 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
VPS13CQ709C8 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.11■□□□□ 0.01
VPS13CQ709C8 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS13CQ709C8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS13CQ709C8 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS13CQ709C8 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.11■□□□□ 0.01
VPS13CQ709C8 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS13CQ709C8 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS13CQ709C8 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
VPS13CQ709C8 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
VPS13CQ709C8 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.11■□□□□ 0.01
VPS13CQ709C8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.11■□□□□ 0.01
VPS13CQ709C8 PDPK2P-202ENST00000562415 1191 ntBASIC15.11■□□□□ 0.01
VPS13CQ709C8 NKAPP1-205ENST00000585790 367 ntBASIC15.11■□□□□ 0.01
VPS13CQ709C8 AC011467.2-201ENST00000598425 242 ntBASIC15.11■□□□□ 0.01
VPS13CQ709C8 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.11■□□□□ 0.01
VPS13CQ709C8 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VPS13CQ709C8 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VPS13CQ709C8 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VPS13CQ709C8 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
VPS13CQ709C8 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
VPS13CQ709C8 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.1■□□□□ 0.01
VPS13CQ709C8 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.1■□□□□ 0.01
VPS13CQ709C8 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
VPS13CQ709C8 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VPS13CQ709C8 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
VPS13CQ709C8 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
VPS13CQ709C8 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS13CQ709C8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VPS13CQ709C8 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS13CQ709C8 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.1■□□□□ 0.01
VPS13CQ709C8 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
VPS13CQ709C8 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS13CQ709C8 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS13CQ709C8 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.1■□□□□ 0.01
VPS13CQ709C8 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.1■□□□□ 0.01
VPS13CQ709C8 KRT18P2-201ENST00000447938 1258 ntBASIC15.1■□□□□ 0.01
VPS13CQ709C8 AL031432.2-201ENST00000566714 459 ntBASIC15.1■□□□□ 0.01
VPS13CQ709C8 AL928711.1-201ENST00000570165 459 ntBASIC15.1■□□□□ 0.01
VPS13CQ709C8 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.1■□□□□ 0.01
VPS13CQ709C8 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.1■□□□□ 0.01
VPS13CQ709C8 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS13CQ709C8 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC15.1■□□□□ 0.01
VPS13CQ709C8 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VPS13CQ709C8 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS13CQ709C8 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
VPS13CQ709C8 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS13CQ709C8 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VPS13CQ709C8 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.1■□□□□ 0.01
VPS13CQ709C8 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS13CQ709C8 AC073621.1-201ENST00000392730 636 ntBASIC15.1■□□□□ 0.01
VPS13CQ709C8 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
VPS13CQ709C8 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC15.1■□□□□ 0.01
VPS13CQ709C8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS13CQ709C8 PMPCAP1-201ENST00000508114 1576 ntBASIC15.1■□□□□ 0.01
VPS13CQ709C8 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS13CQ709C8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC15.09■□□□□ 0.01
VPS13CQ709C8 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
VPS13CQ709C8 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS13CQ709C8 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS13CQ709C8 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.09■□□□□ 0.01
VPS13CQ709C8 AC092865.6-201ENST00000642101 219 ntBASIC15.09■□□□□ 0.01
VPS13CQ709C8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
VPS13CQ709C8 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS13CQ709C8 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
VPS13CQ709C8 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.09■□□□□ 0.01
VPS13CQ709C8 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS13CQ709C8 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.09■□□□□ 0.01
VPS13CQ709C8 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS13CQ709C8 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC15.09■□□□□ 0.01
VPS13CQ709C8 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.09■□□□□ 0.01
VPS13CQ709C8 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS13CQ709C8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS13CQ709C8 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS13CQ709C8 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.09■□□□□ 0.01
VPS13CQ709C8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.09■□□□□ 0.01
VPS13CQ709C8 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.09■□□□□ 0.01
VPS13CQ709C8 AC068472.1-201ENST00000474589 881 ntBASIC15.09■□□□□ 0.01
VPS13CQ709C8 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.09■□□□□ 0.01
VPS13CQ709C8 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.09■□□□□ 0.01
VPS13CQ709C8 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms