Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 KRT16P4-201ENST00000453883 522 ntBASIC19.66■□□□□ 0.74
SLC27A1Q6PCB7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC27A1Q6PCB7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.66■□□□□ 0.74
SLC27A1Q6PCB7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC27A1Q6PCB7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC27A1Q6PCB7 AC005336.2-201ENST00000593183 939 ntBASIC19.66■□□□□ 0.74
SLC27A1Q6PCB7 BNIP3P18-201ENST00000593976 575 ntBASIC19.66■□□□□ 0.74
SLC27A1Q6PCB7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC27A1Q6PCB7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC27A1Q6PCB7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC27A1Q6PCB7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
SLC27A1Q6PCB7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC27A1Q6PCB7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC27A1Q6PCB7 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC27A1Q6PCB7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SLC27A1Q6PCB7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC27A1Q6PCB7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC27A1Q6PCB7 TNXA-203ENST00000507684 2038 ntBASIC19.66■□□□□ 0.74
SLC27A1Q6PCB7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC27A1Q6PCB7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC27A1Q6PCB7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC27A1Q6PCB7 WIZP1-201ENST00000531444 2299 ntBASIC19.65■□□□□ 0.74
SLC27A1Q6PCB7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SLC27A1Q6PCB7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SLC27A1Q6PCB7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC27A1Q6PCB7 AC093503.3-201ENST00000624917 2352 ntBASIC19.65■□□□□ 0.74
SLC27A1Q6PCB7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC27A1Q6PCB7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC27A1Q6PCB7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC27A1Q6PCB7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SLC27A1Q6PCB7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC27A1Q6PCB7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC27A1Q6PCB7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC27A1Q6PCB7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC27A1Q6PCB7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC27A1Q6PCB7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC27A1Q6PCB7 AC026396.1-201ENST00000419388 421 ntBASIC19.65■□□□□ 0.74
SLC27A1Q6PCB7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.65■□□□□ 0.74
SLC27A1Q6PCB7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.65■□□□□ 0.74
SLC27A1Q6PCB7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.65■□□□□ 0.74
SLC27A1Q6PCB7 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC27A1Q6PCB7 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC27A1Q6PCB7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC27A1Q6PCB7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC27A1Q6PCB7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC27A1Q6PCB7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC27A1Q6PCB7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC27A1Q6PCB7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC27A1Q6PCB7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC27A1Q6PCB7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC27A1Q6PCB7 AC132938.6-201ENST00000623828 1655 ntBASIC19.65■□□□□ 0.74
SLC27A1Q6PCB7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SLC27A1Q6PCB7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SLC27A1Q6PCB7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC27A1Q6PCB7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC27A1Q6PCB7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SLC27A1Q6PCB7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC27A1Q6PCB7 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.64■□□□□ 0.73
SLC27A1Q6PCB7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC27A1Q6PCB7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC27A1Q6PCB7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC27A1Q6PCB7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC27A1Q6PCB7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC27A1Q6PCB7 EMBP1-201ENST00000458200 901 ntBASIC19.64■□□□□ 0.73
SLC27A1Q6PCB7 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SLC27A1Q6PCB7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC27A1Q6PCB7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.64■□□□□ 0.73
SLC27A1Q6PCB7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.64■□□□□ 0.73
SLC27A1Q6PCB7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.64■□□□□ 0.73
SLC27A1Q6PCB7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.64■□□□□ 0.73
SLC27A1Q6PCB7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC27A1Q6PCB7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC27A1Q6PCB7 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC27A1Q6PCB7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC27A1Q6PCB7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC27A1Q6PCB7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC27A1Q6PCB7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC27A1Q6PCB7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC27A1Q6PCB7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC27A1Q6PCB7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC27A1Q6PCB7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC27A1Q6PCB7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC27A1Q6PCB7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SLC27A1Q6PCB7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC27A1Q6PCB7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC27A1Q6PCB7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC27A1Q6PCB7 PHGDH-209ENST00000641074 1780 ntBASIC19.63■□□□□ 0.73
SLC27A1Q6PCB7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC27A1Q6PCB7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC27A1Q6PCB7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC27A1Q6PCB7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.63■□□□□ 0.73
SLC27A1Q6PCB7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC27A1Q6PCB7 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC27A1Q6PCB7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC27A1Q6PCB7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC27A1Q6PCB7 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.63■□□□□ 0.73
SLC27A1Q6PCB7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC27A1Q6PCB7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.63■□□□□ 0.73
SLC27A1Q6PCB7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SLC27A1Q6PCB7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms