Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.62■■□□□ 1.05
CNTNAP1P78357 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.62■■□□□ 1.05
CNTNAP1P78357 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CNTNAP1P78357 AC112777.1-201ENST00000540175 1423 ntBASIC21.62■■□□□ 1.05
CNTNAP1P78357 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CNTNAP1P78357 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CNTNAP1P78357 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.62■■□□□ 1.05
CNTNAP1P78357 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CNTNAP1P78357 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.62■■□□□ 1.05
CNTNAP1P78357 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CNTNAP1P78357 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CNTNAP1P78357 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CNTNAP1P78357 CENPM-204ENST00000402420 688 ntTSL 5 BASIC21.61■■□□□ 1.05
CNTNAP1P78357 MEG3-211ENST00000452514 461 ntTSL 3 BASIC21.61■■□□□ 1.05
CNTNAP1P78357 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC21.61■■□□□ 1.05
CNTNAP1P78357 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC21.61■■□□□ 1.05
CNTNAP1P78357 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC21.61■■□□□ 1.05
CNTNAP1P78357 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC21.61■■□□□ 1.05
CNTNAP1P78357 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC21.61■■□□□ 1.05
CNTNAP1P78357 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CNTNAP1P78357 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CNTNAP1P78357 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CNTNAP1P78357 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.61■■□□□ 1.05
CNTNAP1P78357 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CNTNAP1P78357 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.61■■□□□ 1.05
CNTNAP1P78357 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CNTNAP1P78357 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CNTNAP1P78357 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CNTNAP1P78357 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CNTNAP1P78357 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CNTNAP1P78357 KIRREL3-AS3-201ENST00000404882 831 ntBASIC21.61■■□□□ 1.05
CNTNAP1P78357 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC21.61■■□□□ 1.05
CNTNAP1P78357 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.61■■□□□ 1.05
CNTNAP1P78357 AC105339.3-201ENST00000560043 636 ntBASIC21.61■■□□□ 1.05
CNTNAP1P78357 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC21.61■■□□□ 1.05
CNTNAP1P78357 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC21.61■■□□□ 1.05
CNTNAP1P78357 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC21.61■■□□□ 1.05
CNTNAP1P78357 AL138831.2-201ENST00000606564 490 ntBASIC21.61■■□□□ 1.05
CNTNAP1P78357 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CNTNAP1P78357 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CNTNAP1P78357 AP005117.1-201ENST00000584346 1413 ntBASIC21.6■■□□□ 1.05
CNTNAP1P78357 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CNTNAP1P78357 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.6■■□□□ 1.05
CNTNAP1P78357 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CNTNAP1P78357 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.6■■□□□ 1.05
CNTNAP1P78357 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNTNAP1P78357 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CNTNAP1P78357 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNTNAP1P78357 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.6■■□□□ 1.05
CNTNAP1P78357 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNTNAP1P78357 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNTNAP1P78357 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNTNAP1P78357 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.6■■□□□ 1.05
CNTNAP1P78357 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNTNAP1P78357 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNTNAP1P78357 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNTNAP1P78357 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNTNAP1P78357 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
CNTNAP1P78357 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CNTNAP1P78357 AC009947.1-201ENST00000444350 727 ntBASIC21.6■■□□□ 1.05
CNTNAP1P78357 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.6■■□□□ 1.05
CNTNAP1P78357 MYLKP1-201ENST00000509077 1580 ntBASIC21.6■■□□□ 1.05
CNTNAP1P78357 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC21.6■■□□□ 1.05
CNTNAP1P78357 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC21.6■■□□□ 1.05
CNTNAP1P78357 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNTNAP1P78357 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC21.6■■□□□ 1.05
CNTNAP1P78357 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CNTNAP1P78357 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CNTNAP1P78357 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CNTNAP1P78357 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC21.6■■□□□ 1.05
CNTNAP1P78357 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC21.6■■□□□ 1.05
CNTNAP1P78357 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.59■■□□□ 1.05
CNTNAP1P78357 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CNTNAP1P78357 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CNTNAP1P78357 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CNTNAP1P78357 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CNTNAP1P78357 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.59■■□□□ 1.05
CNTNAP1P78357 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CNTNAP1P78357 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.59■■□□□ 1.05
CNTNAP1P78357 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CNTNAP1P78357 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CNTNAP1P78357 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.59■■□□□ 1.05
CNTNAP1P78357 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CNTNAP1P78357 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CNTNAP1P78357 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CNTNAP1P78357 AC092474.2-201ENST00000424288 719 ntBASIC21.59■■□□□ 1.05
CNTNAP1P78357 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC21.59■■□□□ 1.05
CNTNAP1P78357 COX5A-206ENST00000568783 571 ntTSL 3 BASIC21.59■■□□□ 1.05
CNTNAP1P78357 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC21.59■■□□□ 1.05
CNTNAP1P78357 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CNTNAP1P78357 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CNTNAP1P78357 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CNTNAP1P78357 AP002414.3-201ENST00000589352 1468 ntBASIC21.59■■□□□ 1.05
CNTNAP1P78357 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CNTNAP1P78357 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CNTNAP1P78357 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.58■■□□□ 1.05
CNTNAP1P78357 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CNTNAP1P78357 AL499627.1-201ENST00000569373 2188 ntBASIC21.58■■□□□ 1.05
CNTNAP1P78357 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CNTNAP1P78357 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms