Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GTF2A1P52655 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GTF2A1P52655 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GTF2A1P52655 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
GTF2A1P52655 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC17.89■□□□□ 0.46
GTF2A1P52655 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
GTF2A1P52655 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
GTF2A1P52655 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.46
GTF2A1P52655 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.89■□□□□ 0.45
GTF2A1P52655 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.89■□□□□ 0.45
GTF2A1P52655 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GTF2A1P52655 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
GTF2A1P52655 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GTF2A1P52655 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GTF2A1P52655 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
GTF2A1P52655 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GTF2A1P52655 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GTF2A1P52655 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
GTF2A1P52655 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.89■□□□□ 0.45
GTF2A1P52655 PBX2P1-201ENST00000493219 1291 ntBASIC17.89■□□□□ 0.45
GTF2A1P52655 AP001330.3-201ENST00000520123 633 ntBASIC17.89■□□□□ 0.45
GTF2A1P52655 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.89■□□□□ 0.45
GTF2A1P52655 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.89■□□□□ 0.45
GTF2A1P52655 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GTF2A1P52655 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.89■□□□□ 0.45
GTF2A1P52655 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
GTF2A1P52655 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
GTF2A1P52655 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
GTF2A1P52655 AC022188.1-201ENST00000620960 1664 ntBASIC17.89■□□□□ 0.45
GTF2A1P52655 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GTF2A1P52655 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GTF2A1P52655 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GTF2A1P52655 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GTF2A1P52655 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.89■□□□□ 0.45
GTF2A1P52655 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.89■□□□□ 0.45
GTF2A1P52655 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GTF2A1P52655 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
GTF2A1P52655 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
GTF2A1P52655 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GTF2A1P52655 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
GTF2A1P52655 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.88■□□□□ 0.45
GTF2A1P52655 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.88■□□□□ 0.45
GTF2A1P52655 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GTF2A1P52655 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
GTF2A1P52655 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GTF2A1P52655 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.88■□□□□ 0.45
GTF2A1P52655 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GTF2A1P52655 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.88■□□□□ 0.45
GTF2A1P52655 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.88■□□□□ 0.45
GTF2A1P52655 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.88■□□□□ 0.45
GTF2A1P52655 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.88■□□□□ 0.45
GTF2A1P52655 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GTF2A1P52655 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GTF2A1P52655 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.88■□□□□ 0.45
GTF2A1P52655 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GTF2A1P52655 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GTF2A1P52655 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GTF2A1P52655 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GTF2A1P52655 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GTF2A1P52655 POLL-206ENST00000370172 2308 ntTSL 2 BASIC17.88■□□□□ 0.45
GTF2A1P52655 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GTF2A1P52655 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.88■□□□□ 0.45
GTF2A1P52655 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
GTF2A1P52655 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
GTF2A1P52655 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GTF2A1P52655 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GTF2A1P52655 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
GTF2A1P52655 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
GTF2A1P52655 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
GTF2A1P52655 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
GTF2A1P52655 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
GTF2A1P52655 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GTF2A1P52655 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
GTF2A1P52655 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GTF2A1P52655 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC17.87■□□□□ 0.45
GTF2A1P52655 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GTF2A1P52655 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GTF2A1P52655 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.87■□□□□ 0.45
GTF2A1P52655 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
GTF2A1P52655 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GTF2A1P52655 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
GTF2A1P52655 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GTF2A1P52655 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.87■□□□□ 0.45
GTF2A1P52655 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
GTF2A1P52655 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
GTF2A1P52655 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC17.87■□□□□ 0.45
GTF2A1P52655 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.87■□□□□ 0.45
GTF2A1P52655 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GTF2A1P52655 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
GTF2A1P52655 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.87■□□□□ 0.45
GTF2A1P52655 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GTF2A1P52655 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
GTF2A1P52655 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.87■□□□□ 0.45
GTF2A1P52655 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.87■□□□□ 0.45
GTF2A1P52655 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
GTF2A1P52655 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
GTF2A1P52655 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
GTF2A1P52655 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
GTF2A1P52655 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GTF2A1P52655 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms