Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC22.58■■□□□ 1.21
TM4SF1P30408 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TM4SF1P30408 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC22.58■■□□□ 1.21
TM4SF1P30408 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TM4SF1P30408 BEX3-201ENST00000361298 921 ntTSL 2 BASIC22.58■■□□□ 1.21
TM4SF1P30408 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC22.58■■□□□ 1.21
TM4SF1P30408 KRT18P2-201ENST00000447938 1258 ntBASIC22.58■■□□□ 1.21
TM4SF1P30408 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC22.58■■□□□ 1.21
TM4SF1P30408 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC22.58■■□□□ 1.21
TM4SF1P30408 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC22.58■■□□□ 1.21
TM4SF1P30408 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC22.58■■□□□ 1.21
TM4SF1P30408 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC22.58■■□□□ 1.21
TM4SF1P30408 RPS15-207ENST00000591032 550 ntTSL 3 BASIC22.58■■□□□ 1.21
TM4SF1P30408 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC22.58■■□□□ 1.21
TM4SF1P30408 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TM4SF1P30408 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC22.58■■□□□ 1.2
TM4SF1P30408 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
TM4SF1P30408 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
TM4SF1P30408 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC22.57■■□□□ 1.2
TM4SF1P30408 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TM4SF1P30408 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TM4SF1P30408 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TM4SF1P30408 BX005266.1-201ENST00000473402 457 ntBASIC22.57■■□□□ 1.2
TM4SF1P30408 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC22.57■■□□□ 1.2
TM4SF1P30408 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC22.57■■□□□ 1.2
TM4SF1P30408 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC22.57■■□□□ 1.2
TM4SF1P30408 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC22.57■■□□□ 1.2
TM4SF1P30408 COX5A-206ENST00000568783 571 ntTSL 3 BASIC22.57■■□□□ 1.2
TM4SF1P30408 AC064836.3-201ENST00000607928 673 ntBASIC22.57■■□□□ 1.2
TM4SF1P30408 AC073592.4-201ENST00000623827 446 ntBASIC22.57■■□□□ 1.2
TM4SF1P30408 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC22.57■■□□□ 1.2
TM4SF1P30408 PMPCAP1-201ENST00000508114 1576 ntBASIC22.57■■□□□ 1.2
TM4SF1P30408 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC22.57■■□□□ 1.2
TM4SF1P30408 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC22.57■■□□□ 1.2
TM4SF1P30408 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC22.57■■□□□ 1.2
TM4SF1P30408 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC22.57■■□□□ 1.2
TM4SF1P30408 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
TM4SF1P30408 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC22.57■■□□□ 1.2
TM4SF1P30408 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TM4SF1P30408 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TM4SF1P30408 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC22.56■■□□□ 1.2
TM4SF1P30408 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
TM4SF1P30408 AC211486.1-202ENST00000416371 468 ntBASIC22.56■■□□□ 1.2
TM4SF1P30408 MCCD1P2-201ENST00000423228 335 ntBASIC22.56■■□□□ 1.2
TM4SF1P30408 AC007967.3-201ENST00000434308 558 ntBASIC22.56■■□□□ 1.2
TM4SF1P30408 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC22.56■■□□□ 1.2
TM4SF1P30408 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TM4SF1P30408 AC211476.1-201ENST00000503899 468 ntBASIC22.56■■□□□ 1.2
TM4SF1P30408 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TM4SF1P30408 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC22.56■■□□□ 1.2
TM4SF1P30408 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC22.56■■□□□ 1.2
TM4SF1P30408 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TM4SF1P30408 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC22.56■■□□□ 1.2
TM4SF1P30408 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TM4SF1P30408 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
TM4SF1P30408 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
TM4SF1P30408 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
TM4SF1P30408 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.56■■□□□ 1.2
TM4SF1P30408 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TM4SF1P30408 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC22.56■■□□□ 1.2
TM4SF1P30408 KRT18P28-201ENST00000453838 1332 ntBASIC22.56■■□□□ 1.2
TM4SF1P30408 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC22.56■■□□□ 1.2
TM4SF1P30408 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TM4SF1P30408 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TM4SF1P30408 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TM4SF1P30408 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
TM4SF1P30408 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TM4SF1P30408 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC22.55■■□□□ 1.2
TM4SF1P30408 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC22.55■■□□□ 1.2
TM4SF1P30408 PRYP5-201ENST00000451909 266 ntBASIC22.55■■□□□ 1.2
TM4SF1P30408 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC22.55■■□□□ 1.2
TM4SF1P30408 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC22.55■■□□□ 1.2
TM4SF1P30408 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TM4SF1P30408 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC22.55■■□□□ 1.2
TM4SF1P30408 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC22.55■■□□□ 1.2
TM4SF1P30408 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TM4SF1P30408 COPE-211ENST00000600932 1144 ntTSL 5 BASIC22.55■■□□□ 1.2
TM4SF1P30408 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TM4SF1P30408 AL022326.1-202ENST00000641533 845 ntBASIC22.55■■□□□ 1.2
TM4SF1P30408 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC22.55■■□□□ 1.2
TM4SF1P30408 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC22.55■■□□□ 1.2
TM4SF1P30408 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.55■■□□□ 1.2
TM4SF1P30408 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TM4SF1P30408 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC22.55■■□□□ 1.2
TM4SF1P30408 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TM4SF1P30408 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TM4SF1P30408 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC22.54■■□□□ 1.2
TM4SF1P30408 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC22.54■■□□□ 1.2
TM4SF1P30408 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC22.54■■□□□ 1.2
TM4SF1P30408 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TM4SF1P30408 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
TM4SF1P30408 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
TM4SF1P30408 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
TM4SF1P30408 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC22.54■■□□□ 1.2
TM4SF1P30408 YBX1P5-201ENST00000509441 847 ntBASIC22.54■■□□□ 1.2
TM4SF1P30408 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
TM4SF1P30408 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC22.54■■□□□ 1.2
TM4SF1P30408 ETFA-208ENST00000559602 792 ntTSL 3 BASIC22.54■■□□□ 1.2
TM4SF1P30408 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC22.54■■□□□ 1.2
TM4SF1P30408 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms