Protein–RNA interactions for Protein: P0DJJ0

SRGAP2C, SLIT-ROBO Rho GTPase-activating protein 2C, humanhuman

Predictions only

Length 459 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2CP0DJJ0 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.01■□□□□ 0.79
SRGAP2CP0DJJ0 LINC00167-201ENST00000530583 1419 ntBASIC20.01■□□□□ 0.79
SRGAP2CP0DJJ0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRGAP2CP0DJJ0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRGAP2CP0DJJ0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SRGAP2CP0DJJ0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SRGAP2CP0DJJ0 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20■□□□□ 0.79
SRGAP2CP0DJJ0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20■□□□□ 0.79
SRGAP2CP0DJJ0 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SRGAP2CP0DJJ0 WIZP1-201ENST00000531444 2299 ntBASIC20■□□□□ 0.79
SRGAP2CP0DJJ0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SRGAP2CP0DJJ0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SRGAP2CP0DJJ0 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SRGAP2CP0DJJ0 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SRGAP2CP0DJJ0 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SRGAP2CP0DJJ0 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SRGAP2CP0DJJ0 TSPY12P-201ENST00000421279 868 ntBASIC20■□□□□ 0.79
SRGAP2CP0DJJ0 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20■□□□□ 0.79
SRGAP2CP0DJJ0 AC074051.2-201ENST00000565115 352 ntBASIC20■□□□□ 0.79
SRGAP2CP0DJJ0 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SRGAP2CP0DJJ0 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20■□□□□ 0.79
SRGAP2CP0DJJ0 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20■□□□□ 0.79
SRGAP2CP0DJJ0 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20■□□□□ 0.79
SRGAP2CP0DJJ0 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20■□□□□ 0.79
SRGAP2CP0DJJ0 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SRGAP2CP0DJJ0 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SRGAP2CP0DJJ0 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SRGAP2CP0DJJ0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20■□□□□ 0.79
SRGAP2CP0DJJ0 ESPNP-201ENST00000270691 2015 ntBASIC20■□□□□ 0.79
SRGAP2CP0DJJ0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SRGAP2CP0DJJ0 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20■□□□□ 0.79
SRGAP2CP0DJJ0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SRGAP2CP0DJJ0 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SRGAP2CP0DJJ0 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRGAP2CP0DJJ0 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SRGAP2CP0DJJ0 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRGAP2CP0DJJ0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRGAP2CP0DJJ0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRGAP2CP0DJJ0 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRGAP2CP0DJJ0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SRGAP2CP0DJJ0 AC004408.2-201ENST00000623613 2777 ntBASIC19.99■□□□□ 0.79
SRGAP2CP0DJJ0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SRGAP2CP0DJJ0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.99■□□□□ 0.79
SRGAP2CP0DJJ0 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SRGAP2CP0DJJ0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
SRGAP2CP0DJJ0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRGAP2CP0DJJ0 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRGAP2CP0DJJ0 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SRGAP2CP0DJJ0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SRGAP2CP0DJJ0 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.99■□□□□ 0.79
SRGAP2CP0DJJ0 AC104819.1-201ENST00000504587 486 ntBASIC19.99■□□□□ 0.79
SRGAP2CP0DJJ0 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.99■□□□□ 0.79
SRGAP2CP0DJJ0 AC012615.1-201ENST00000565797 1299 ntBASIC19.99■□□□□ 0.79
SRGAP2CP0DJJ0 AC011840.4-201ENST00000578471 627 ntBASIC19.99■□□□□ 0.79
SRGAP2CP0DJJ0 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
SRGAP2CP0DJJ0 AL121894.2-201ENST00000602977 491 ntBASIC19.99■□□□□ 0.79
SRGAP2CP0DJJ0 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SRGAP2CP0DJJ0 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.99■□□□□ 0.79
SRGAP2CP0DJJ0 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRGAP2CP0DJJ0 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRGAP2CP0DJJ0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SRGAP2CP0DJJ0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SRGAP2CP0DJJ0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRGAP2CP0DJJ0 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.99■□□□□ 0.79
SRGAP2CP0DJJ0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRGAP2CP0DJJ0 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SRGAP2CP0DJJ0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.98■□□□□ 0.79
SRGAP2CP0DJJ0 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SRGAP2CP0DJJ0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.98■□□□□ 0.79
SRGAP2CP0DJJ0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SRGAP2CP0DJJ0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SRGAP2CP0DJJ0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.98■□□□□ 0.79
SRGAP2CP0DJJ0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SRGAP2CP0DJJ0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SRGAP2CP0DJJ0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SRGAP2CP0DJJ0 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.98■□□□□ 0.79
SRGAP2CP0DJJ0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.98■□□□□ 0.79
SRGAP2CP0DJJ0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
SRGAP2CP0DJJ0 AC091607.1-201ENST00000490318 1060 ntBASIC19.98■□□□□ 0.79
SRGAP2CP0DJJ0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
SRGAP2CP0DJJ0 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.98■□□□□ 0.79
SRGAP2CP0DJJ0 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SRGAP2CP0DJJ0 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.98■□□□□ 0.79
SRGAP2CP0DJJ0 Z69720.1-201ENST00000601483 472 ntBASIC19.98■□□□□ 0.79
SRGAP2CP0DJJ0 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.98■□□□□ 0.79
SRGAP2CP0DJJ0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SRGAP2CP0DJJ0 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
SRGAP2CP0DJJ0 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SRGAP2CP0DJJ0 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.98■□□□□ 0.79
SRGAP2CP0DJJ0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.98■□□□□ 0.79
SRGAP2CP0DJJ0 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SRGAP2CP0DJJ0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.98■□□□□ 0.79
SRGAP2CP0DJJ0 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SRGAP2CP0DJJ0 AC138932.1-201ENST00000534164 6830 ntBASIC19.97■□□□□ 0.79
SRGAP2CP0DJJ0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.97■□□□□ 0.79
SRGAP2CP0DJJ0 AC073592.3-201ENST00000625118 1834 ntBASIC19.97■□□□□ 0.79
SRGAP2CP0DJJ0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SRGAP2CP0DJJ0 AL020996.1-203ENST00000536896 2307 ntBASIC19.97■□□□□ 0.79
SRGAP2CP0DJJ0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
SRGAP2CP0DJJ0 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms