Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC1P07992 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.18■□□□□ 0.18
ERCC1P07992 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ERCC1P07992 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.18■□□□□ 0.18
ERCC1P07992 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.18■□□□□ 0.18
ERCC1P07992 DUX4L26-201ENST00000489078 1255 ntBASIC16.18■□□□□ 0.18
ERCC1P07992 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.18■□□□□ 0.18
ERCC1P07992 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.18■□□□□ 0.18
ERCC1P07992 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.18■□□□□ 0.18
ERCC1P07992 AC140113.3-201ENST00000605663 199 ntBASIC16.18■□□□□ 0.18
ERCC1P07992 AL023803.3-201ENST00000615559 522 ntBASIC16.18■□□□□ 0.18
ERCC1P07992 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
ERCC1P07992 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC1P07992 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.18■□□□□ 0.18
ERCC1P07992 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
ERCC1P07992 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC1P07992 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC1P07992 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.18■□□□□ 0.18
ERCC1P07992 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC1P07992 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC1P07992 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
ERCC1P07992 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC1P07992 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.18■□□□□ 0.18
ERCC1P07992 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
ERCC1P07992 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC1P07992 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
ERCC1P07992 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC1P07992 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
ERCC1P07992 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.18■□□□□ 0.18
ERCC1P07992 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC1P07992 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
ERCC1P07992 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC1P07992 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC1P07992 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
ERCC1P07992 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC1P07992 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC1P07992 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC1P07992 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.18■□□□□ 0.18
ERCC1P07992 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC1P07992 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
ERCC1P07992 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC1P07992 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC1P07992 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC1P07992 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC1P07992 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC1P07992 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC1P07992 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC1P07992 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC1P07992 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC1P07992 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC1P07992 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC1P07992 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.17■□□□□ 0.18
ERCC1P07992 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
ERCC1P07992 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.17■□□□□ 0.18
ERCC1P07992 COX11P1-201ENST00000489116 835 ntBASIC16.17■□□□□ 0.18
ERCC1P07992 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.17■□□□□ 0.18
ERCC1P07992 AC087388.1-201ENST00000571370 1112 ntBASIC16.17■□□□□ 0.18
ERCC1P07992 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ERCC1P07992 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC1P07992 MTMR9LP-203ENST00000426597 1545 ntBASIC16.17■□□□□ 0.18
ERCC1P07992 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC1P07992 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC1P07992 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
ERCC1P07992 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.17■□□□□ 0.18
ERCC1P07992 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
ERCC1P07992 KRT8P3-201ENST00000519669 1449 ntBASIC16.17■□□□□ 0.18
ERCC1P07992 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.17■□□□□ 0.18
ERCC1P07992 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC1P07992 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
ERCC1P07992 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC1P07992 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC1P07992 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC1P07992 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC1P07992 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.17■□□□□ 0.18
ERCC1P07992 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC1P07992 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC1P07992 KRT8P32-201ENST00000512863 1461 ntBASIC16.16■□□□□ 0.18
ERCC1P07992 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC1P07992 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC1P07992 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC1P07992 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
ERCC1P07992 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC1P07992 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
ERCC1P07992 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
ERCC1P07992 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC1P07992 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC1P07992 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC1P07992 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.16■□□□□ 0.18
ERCC1P07992 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
ERCC1P07992 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC1P07992 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC1P07992 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC1P07992 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.16■□□□□ 0.18
ERCC1P07992 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.16■□□□□ 0.18
ERCC1P07992 AL445228.2-201ENST00000605589 952 ntBASIC16.16■□□□□ 0.18
ERCC1P07992 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
ERCC1P07992 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.16■□□□□ 0.18
ERCC1P07992 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC1P07992 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC1P07992 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms