Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.09■□□□□ 0.81
CD4P01730 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD4P01730 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD4P01730 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CD4P01730 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD4P01730 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD4P01730 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.09■□□□□ 0.81
CD4P01730 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD4P01730 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD4P01730 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD4P01730 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CD4P01730 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CD4P01730 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CD4P01730 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CD4P01730 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CD4P01730 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CD4P01730 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CD4P01730 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CD4P01730 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CD4P01730 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CD4P01730 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CD4P01730 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.08■□□□□ 0.81
CD4P01730 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CD4P01730 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.08■□□□□ 0.81
CD4P01730 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.08■□□□□ 0.81
CD4P01730 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.08■□□□□ 0.81
CD4P01730 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.08■□□□□ 0.81
CD4P01730 AC021087.4-201ENST00000563761 564 ntBASIC20.08■□□□□ 0.81
CD4P01730 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.08■□□□□ 0.81
CD4P01730 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.08■□□□□ 0.81
CD4P01730 AC055717.3-201ENST00000622967 595 ntBASIC20.08■□□□□ 0.81
CD4P01730 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CD4P01730 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CD4P01730 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CD4P01730 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CD4P01730 AP005117.1-201ENST00000584346 1413 ntBASIC20.08■□□□□ 0.8
CD4P01730 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CD4P01730 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CD4P01730 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CD4P01730 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.08■□□□□ 0.8
CD4P01730 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CD4P01730 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CD4P01730 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.07■□□□□ 0.8
CD4P01730 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CD4P01730 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CD4P01730 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CD4P01730 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CD4P01730 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CD4P01730 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CD4P01730 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
CD4P01730 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CD4P01730 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CD4P01730 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
CD4P01730 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CD4P01730 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CD4P01730 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC20.07■□□□□ 0.8
CD4P01730 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CD4P01730 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.07■□□□□ 0.8
CD4P01730 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CD4P01730 AC011467.2-201ENST00000598425 242 ntBASIC20.07■□□□□ 0.8
CD4P01730 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.07■□□□□ 0.8
CD4P01730 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.07■□□□□ 0.8
CD4P01730 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CD4P01730 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CD4P01730 AC104109.2-201ENST00000602919 1418 ntBASIC20.07■□□□□ 0.8
CD4P01730 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.07■□□□□ 0.8
CD4P01730 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CD4P01730 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CD4P01730 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CD4P01730 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CD4P01730 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CD4P01730 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CD4P01730 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CD4P01730 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.06■□□□□ 0.8
CD4P01730 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CD4P01730 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.06■□□□□ 0.8
CD4P01730 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CD4P01730 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.06■□□□□ 0.8
CD4P01730 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CD4P01730 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CD4P01730 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CD4P01730 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CD4P01730 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.06■□□□□ 0.8
CD4P01730 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CD4P01730 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CD4P01730 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CD4P01730 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CD4P01730 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.06■□□□□ 0.8
CD4P01730 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CD4P01730 SART3-203ENST00000546611 1184 ntBASIC20.06■□□□□ 0.8
CD4P01730 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.06■□□□□ 0.8
CD4P01730 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.06■□□□□ 0.8
CD4P01730 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CD4P01730 AC027601.4-201ENST00000611259 610 ntBASIC20.06■□□□□ 0.8
CD4P01730 FAM197Y3-203ENST00000618346 717 ntBASIC20.06■□□□□ 0.8
CD4P01730 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.06■□□□□ 0.8
CD4P01730 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.06■□□□□ 0.8
CD4P01730 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.06■□□□□ 0.8
CD4P01730 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.06■□□□□ 0.8
CD4P01730 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms