Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TOP3BO95985 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
TOP3BO95985 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.68■□□□□ 0.58
TOP3BO95985 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
TOP3BO95985 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.68■□□□□ 0.58
TOP3BO95985 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TOP3BO95985 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TOP3BO95985 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TOP3BO95985 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TOP3BO95985 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
TOP3BO95985 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TOP3BO95985 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.68■□□□□ 0.58
TOP3BO95985 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TOP3BO95985 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TOP3BO95985 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TOP3BO95985 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TOP3BO95985 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.68■□□□□ 0.58
TOP3BO95985 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.68■□□□□ 0.58
TOP3BO95985 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TOP3BO95985 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.68■□□□□ 0.58
TOP3BO95985 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.67■□□□□ 0.58
TOP3BO95985 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TOP3BO95985 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.67■□□□□ 0.58
TOP3BO95985 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TOP3BO95985 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TOP3BO95985 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TOP3BO95985 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.67■□□□□ 0.58
TOP3BO95985 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.67■□□□□ 0.58
TOP3BO95985 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TOP3BO95985 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TOP3BO95985 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.67■□□□□ 0.58
TOP3BO95985 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TOP3BO95985 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
TOP3BO95985 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.67■□□□□ 0.58
TOP3BO95985 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TOP3BO95985 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.67■□□□□ 0.58
TOP3BO95985 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TOP3BO95985 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TOP3BO95985 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TOP3BO95985 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.67■□□□□ 0.58
TOP3BO95985 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.67■□□□□ 0.58
TOP3BO95985 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.67■□□□□ 0.58
TOP3BO95985 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.67■□□□□ 0.58
TOP3BO95985 AL512604.3-201ENST00000569583 964 ntBASIC18.67■□□□□ 0.58
TOP3BO95985 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
TOP3BO95985 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.67■□□□□ 0.58
TOP3BO95985 AC092329.2-201ENST00000598402 547 ntBASIC18.67■□□□□ 0.58
TOP3BO95985 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.67■□□□□ 0.58
TOP3BO95985 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TOP3BO95985 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TOP3BO95985 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
TOP3BO95985 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.67■□□□□ 0.58
TOP3BO95985 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TOP3BO95985 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TOP3BO95985 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
TOP3BO95985 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TOP3BO95985 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.67■□□□□ 0.58
TOP3BO95985 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TOP3BO95985 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TOP3BO95985 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.66■□□□□ 0.58
TOP3BO95985 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TOP3BO95985 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TOP3BO95985 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TOP3BO95985 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TOP3BO95985 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TOP3BO95985 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.66■□□□□ 0.58
TOP3BO95985 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TOP3BO95985 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TOP3BO95985 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TOP3BO95985 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TOP3BO95985 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.66■□□□□ 0.58
TOP3BO95985 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TOP3BO95985 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TOP3BO95985 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.66■□□□□ 0.58
TOP3BO95985 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.66■□□□□ 0.58
TOP3BO95985 SPDYE13P-201ENST00000445314 798 ntBASIC18.66■□□□□ 0.58
TOP3BO95985 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TOP3BO95985 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.66■□□□□ 0.58
TOP3BO95985 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.66■□□□□ 0.58
TOP3BO95985 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TOP3BO95985 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TOP3BO95985 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TOP3BO95985 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TOP3BO95985 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TOP3BO95985 KRT8P11-201ENST00000409686 1436 ntBASIC18.66■□□□□ 0.58
TOP3BO95985 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.65■□□□□ 0.58
TOP3BO95985 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TOP3BO95985 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TOP3BO95985 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
TOP3BO95985 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TOP3BO95985 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
TOP3BO95985 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TOP3BO95985 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TOP3BO95985 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.65■□□□□ 0.58
TOP3BO95985 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TOP3BO95985 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TOP3BO95985 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TOP3BO95985 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TOP3BO95985 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TOP3BO95985 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms