Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LGR5O75473 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LGR5O75473 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LGR5O75473 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
LGR5O75473 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.18■□□□□ 0.82
LGR5O75473 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LGR5O75473 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.18■□□□□ 0.82
LGR5O75473 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
LGR5O75473 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.18■□□□□ 0.82
LGR5O75473 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LGR5O75473 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.18■□□□□ 0.82
LGR5O75473 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.18■□□□□ 0.82
LGR5O75473 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.18■□□□□ 0.82
LGR5O75473 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.18■□□□□ 0.82
LGR5O75473 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.18■□□□□ 0.82
LGR5O75473 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.18■□□□□ 0.82
LGR5O75473 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LGR5O75473 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.18■□□□□ 0.82
LGR5O75473 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LGR5O75473 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.18■□□□□ 0.82
LGR5O75473 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
LGR5O75473 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LGR5O75473 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LGR5O75473 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.18■□□□□ 0.82
LGR5O75473 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LGR5O75473 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LGR5O75473 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LGR5O75473 AC026471.1-201ENST00000564629 3026 ntBASIC20.18■□□□□ 0.82
LGR5O75473 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LGR5O75473 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.17■□□□□ 0.82
LGR5O75473 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LGR5O75473 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
LGR5O75473 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LGR5O75473 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
LGR5O75473 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LGR5O75473 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LGR5O75473 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.17■□□□□ 0.82
LGR5O75473 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.17■□□□□ 0.82
LGR5O75473 SAPCD2P3-201ENST00000455031 850 ntBASIC20.17■□□□□ 0.82
LGR5O75473 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.17■□□□□ 0.82
LGR5O75473 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.17■□□□□ 0.82
LGR5O75473 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.17■□□□□ 0.82
LGR5O75473 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.17■□□□□ 0.82
LGR5O75473 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.17■□□□□ 0.82
LGR5O75473 AC006538.3-201ENST00000612495 578 ntBASIC20.17■□□□□ 0.82
LGR5O75473 AC114341.1-201ENST00000618070 349 ntBASIC20.17■□□□□ 0.82
LGR5O75473 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.17■□□□□ 0.82
LGR5O75473 HLA-A-201ENST00000376802 1334 ntBASIC20.17■□□□□ 0.82
LGR5O75473 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LGR5O75473 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LGR5O75473 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LGR5O75473 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LGR5O75473 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
LGR5O75473 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LGR5O75473 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LGR5O75473 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.17■□□□□ 0.82
LGR5O75473 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LGR5O75473 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.16■□□□□ 0.82
LGR5O75473 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.16■□□□□ 0.82
LGR5O75473 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
LGR5O75473 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LGR5O75473 AC073592.3-201ENST00000625118 1834 ntBASIC20.16■□□□□ 0.82
LGR5O75473 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.16■□□□□ 0.82
LGR5O75473 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LGR5O75473 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LGR5O75473 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LGR5O75473 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LGR5O75473 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.16■□□□□ 0.82
LGR5O75473 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LGR5O75473 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.16■□□□□ 0.82
LGR5O75473 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LGR5O75473 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.16■□□□□ 0.82
LGR5O75473 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
LGR5O75473 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.16■□□□□ 0.82
LGR5O75473 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LGR5O75473 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.16■□□□□ 0.82
LGR5O75473 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.16■□□□□ 0.82
LGR5O75473 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
LGR5O75473 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LGR5O75473 MIR5100-201ENST00000579544 119 ntBASIC20.16■□□□□ 0.82
LGR5O75473 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LGR5O75473 REXO1L6P-202ENST00000619970 1078 ntBASIC20.16■□□□□ 0.82
LGR5O75473 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LGR5O75473 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
LGR5O75473 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LGR5O75473 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LGR5O75473 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LGR5O75473 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LGR5O75473 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.15■□□□□ 0.82
LGR5O75473 ESPNP-201ENST00000270691 2015 ntBASIC20.15■□□□□ 0.82
LGR5O75473 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.15■□□□□ 0.82
LGR5O75473 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
LGR5O75473 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
LGR5O75473 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.15■□□□□ 0.82
LGR5O75473 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
LGR5O75473 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LGR5O75473 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LGR5O75473 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LGR5O75473 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.15■□□□□ 0.82
LGR5O75473 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms