Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.06■□□□□ 0.32
HCN1O60741 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.06■□□□□ 0.32
HCN1O60741 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
HCN1O60741 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HCN1O60741 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HCN1O60741 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HCN1O60741 KRT8P3-201ENST00000519669 1449 ntBASIC17.05■□□□□ 0.32
HCN1O60741 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HCN1O60741 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.05■□□□□ 0.32
HCN1O60741 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HCN1O60741 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HCN1O60741 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HCN1O60741 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HCN1O60741 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HCN1O60741 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.05■□□□□ 0.32
HCN1O60741 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.05■□□□□ 0.32
HCN1O60741 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HCN1O60741 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.05■□□□□ 0.32
HCN1O60741 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.05■□□□□ 0.32
HCN1O60741 AL441883.1-201ENST00000566170 1045 ntBASIC17.05■□□□□ 0.32
HCN1O60741 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.05■□□□□ 0.32
HCN1O60741 MIR4674-201ENST00000582457 87 ntBASIC17.05■□□□□ 0.32
HCN1O60741 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HCN1O60741 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.05■□□□□ 0.32
HCN1O60741 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HCN1O60741 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
HCN1O60741 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HCN1O60741 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HCN1O60741 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HCN1O60741 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HCN1O60741 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.05■□□□□ 0.32
HCN1O60741 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.05■□□□□ 0.32
HCN1O60741 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.05■□□□□ 0.32
HCN1O60741 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HCN1O60741 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HCN1O60741 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HCN1O60741 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HCN1O60741 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.04■□□□□ 0.32
HCN1O60741 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HCN1O60741 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
HCN1O60741 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HCN1O60741 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HCN1O60741 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HCN1O60741 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HCN1O60741 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.04■□□□□ 0.32
HCN1O60741 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HCN1O60741 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.04■□□□□ 0.32
HCN1O60741 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.04■□□□□ 0.32
HCN1O60741 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.04■□□□□ 0.32
HCN1O60741 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.04■□□□□ 0.32
HCN1O60741 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HCN1O60741 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.04■□□□□ 0.32
HCN1O60741 CR769767.2-201ENST00000622735 460 ntBASIC17.04■□□□□ 0.32
HCN1O60741 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HCN1O60741 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HCN1O60741 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HCN1O60741 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HCN1O60741 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HCN1O60741 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.04■□□□□ 0.32
HCN1O60741 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HCN1O60741 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HCN1O60741 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HCN1O60741 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.04■□□□□ 0.32
HCN1O60741 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HCN1O60741 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HCN1O60741 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.03■□□□□ 0.32
HCN1O60741 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HCN1O60741 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
HCN1O60741 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HCN1O60741 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HCN1O60741 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.03■□□□□ 0.32
HCN1O60741 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HCN1O60741 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.03■□□□□ 0.32
HCN1O60741 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.03■□□□□ 0.32
HCN1O60741 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HCN1O60741 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HCN1O60741 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
HCN1O60741 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.03■□□□□ 0.32
HCN1O60741 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HCN1O60741 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HCN1O60741 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.03■□□□□ 0.32
HCN1O60741 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.03■□□□□ 0.32
HCN1O60741 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.03■□□□□ 0.32
HCN1O60741 AC091076.1-201ENST00000610741 619 ntBASIC17.03■□□□□ 0.32
HCN1O60741 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.03■□□□□ 0.32
HCN1O60741 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.03■□□□□ 0.32
HCN1O60741 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
HCN1O60741 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HCN1O60741 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HCN1O60741 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
HCN1O60741 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HCN1O60741 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HCN1O60741 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HCN1O60741 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HCN1O60741 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HCN1O60741 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.03■□□□□ 0.32
HCN1O60741 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HCN1O60741 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HCN1O60741 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.03■□□□□ 0.32
HCN1O60741 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms