Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH17O14917 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH17O14917 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDH17O14917 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH17O14917 LTB4R2-202ENST00000528054 3092 ntBASIC17.42■□□□□ 0.38
PCDH17O14917 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH17O14917 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PCDH17O14917 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH17O14917 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH17O14917 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
PCDH17O14917 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDH17O14917 AC008556.1-201ENST00000610908 2040 ntBASIC17.42■□□□□ 0.38
PCDH17O14917 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDH17O14917 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PCDH17O14917 IER3-202ENST00000376377 1350 ntBASIC17.41■□□□□ 0.38
PCDH17O14917 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH17O14917 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH17O14917 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDH17O14917 ABALON-201ENST00000629058 1903 ntBASIC17.41■□□□□ 0.38
PCDH17O14917 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH17O14917 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH17O14917 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH17O14917 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDH17O14917 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH17O14917 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH17O14917 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
PCDH17O14917 SPDYE15P-201ENST00000424157 909 ntBASIC17.41■□□□□ 0.38
PCDH17O14917 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDH17O14917 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH17O14917 VENTXP5-201ENST00000523979 775 ntBASIC17.41■□□□□ 0.38
PCDH17O14917 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.41■□□□□ 0.38
PCDH17O14917 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.41■□□□□ 0.38
PCDH17O14917 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDH17O14917 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDH17O14917 AC116407.4-201ENST00000623319 1061 ntBASIC17.41■□□□□ 0.38
PCDH17O14917 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDH17O14917 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH17O14917 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH17O14917 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PCDH17O14917 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH17O14917 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH17O14917 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.41■□□□□ 0.38
PCDH17O14917 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PCDH17O14917 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PCDH17O14917 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH17O14917 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH17O14917 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH17O14917 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDH17O14917 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH17O14917 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH17O14917 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH17O14917 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH17O14917 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH17O14917 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PCDH17O14917 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH17O14917 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH17O14917 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PCDH17O14917 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PCDH17O14917 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH17O14917 HBZP1-201ENST00000354915 429 ntBASIC17.4■□□□□ 0.38
PCDH17O14917 AP000593.1-201ENST00000393668 712 ntBASIC17.4■□□□□ 0.38
PCDH17O14917 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH17O14917 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH17O14917 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH17O14917 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDH17O14917 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
PCDH17O14917 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.4■□□□□ 0.38
PCDH17O14917 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PCDH17O14917 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDH17O14917 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
PCDH17O14917 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDH17O14917 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PCDH17O14917 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PCDH17O14917 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH17O14917 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.4■□□□□ 0.38
PCDH17O14917 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH17O14917 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDH17O14917 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH17O14917 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH17O14917 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.39■□□□□ 0.38
PCDH17O14917 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
PCDH17O14917 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH17O14917 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDH17O14917 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH17O14917 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH17O14917 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
PCDH17O14917 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDH17O14917 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDH17O14917 KRT18P41-201ENST00000518924 1277 ntBASIC17.39■□□□□ 0.37
PCDH17O14917 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.39■□□□□ 0.37
PCDH17O14917 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH17O14917 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.39■□□□□ 0.37
PCDH17O14917 AC083849.1-201ENST00000615227 514 ntBASIC17.39■□□□□ 0.37
PCDH17O14917 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.39■□□□□ 0.37
PCDH17O14917 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH17O14917 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH17O14917 AC073592.3-201ENST00000625118 1834 ntBASIC17.39■□□□□ 0.37
PCDH17O14917 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH17O14917 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PCDH17O14917 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms