Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN9O14815 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CAPN9O14815 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN9O14815 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN9O14815 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
CAPN9O14815 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN9O14815 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN9O14815 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.24■□□□□ 0.67
CAPN9O14815 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN9O14815 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN9O14815 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.24■□□□□ 0.67
CAPN9O14815 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN9O14815 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN9O14815 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN9O14815 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN9O14815 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN9O14815 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN9O14815 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.24■□□□□ 0.67
CAPN9O14815 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN9O14815 AC112907.2-201ENST00000448639 330 ntBASIC19.24■□□□□ 0.67
CAPN9O14815 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CAPN9O14815 NTF6B-201ENST00000591913 560 ntBASIC19.24■□□□□ 0.67
CAPN9O14815 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN9O14815 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN9O14815 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CAPN9O14815 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN9O14815 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CAPN9O14815 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN9O14815 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CAPN9O14815 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN9O14815 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.24■□□□□ 0.67
CAPN9O14815 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN9O14815 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.24■□□□□ 0.67
CAPN9O14815 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN9O14815 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CAPN9O14815 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN9O14815 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN9O14815 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN9O14815 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN9O14815 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN9O14815 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
CAPN9O14815 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.23■□□□□ 0.67
CAPN9O14815 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.23■□□□□ 0.67
CAPN9O14815 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN9O14815 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.23■□□□□ 0.67
CAPN9O14815 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN9O14815 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN9O14815 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN9O14815 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN9O14815 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN9O14815 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.23■□□□□ 0.67
CAPN9O14815 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN9O14815 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN9O14815 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN9O14815 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN9O14815 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.23■□□□□ 0.67
CAPN9O14815 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.23■□□□□ 0.67
CAPN9O14815 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN9O14815 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
CAPN9O14815 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN9O14815 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN9O14815 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN9O14815 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.23■□□□□ 0.67
CAPN9O14815 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN9O14815 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.23■□□□□ 0.67
CAPN9O14815 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN9O14815 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN9O14815 AC018470.1-201ENST00000624790 3129 ntBASIC19.23■□□□□ 0.67
CAPN9O14815 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN9O14815 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN9O14815 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN9O14815 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CAPN9O14815 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN9O14815 OR6D1P-202ENST00000641007 5290 ntBASIC19.22■□□□□ 0.67
CAPN9O14815 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.22■□□□□ 0.67
CAPN9O14815 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN9O14815 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN9O14815 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
CAPN9O14815 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN9O14815 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN9O14815 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN9O14815 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.22■□□□□ 0.67
CAPN9O14815 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CAPN9O14815 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.22■□□□□ 0.67
CAPN9O14815 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.22■□□□□ 0.67
CAPN9O14815 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.22■□□□□ 0.67
CAPN9O14815 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN9O14815 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN9O14815 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.22■□□□□ 0.67
CAPN9O14815 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CAPN9O14815 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.22■□□□□ 0.67
CAPN9O14815 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.22■□□□□ 0.67
CAPN9O14815 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.22■□□□□ 0.67
CAPN9O14815 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN9O14815 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN9O14815 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN9O14815 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.22■□□□□ 0.67
CAPN9O14815 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.22■□□□□ 0.67
CAPN9O14815 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN9O14815 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms