Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.57■□□□□ 0.4
SLC28A1O00337 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.57■□□□□ 0.4
SLC28A1O00337 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC28A1O00337 AP000525.1-201ENST00000608286 694 ntBASIC17.57■□□□□ 0.4
SLC28A1O00337 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC28A1O00337 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC28A1O00337 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC28A1O00337 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC28A1O00337 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC28A1O00337 LINC00896-202ENST00000609602 2128 ntBASIC17.57■□□□□ 0.4
SLC28A1O00337 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC28A1O00337 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC28A1O00337 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SLC28A1O00337 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC28A1O00337 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC28A1O00337 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC28A1O00337 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC28A1O00337 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC28A1O00337 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SLC28A1O00337 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC28A1O00337 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC28A1O00337 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC28A1O00337 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC28A1O00337 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SLC28A1O00337 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.56■□□□□ 0.4
SLC28A1O00337 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC28A1O00337 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
SLC28A1O00337 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC28A1O00337 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC28A1O00337 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SLC28A1O00337 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC28A1O00337 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.56■□□□□ 0.4
SLC28A1O00337 TSPY7P-201ENST00000431358 1114 ntBASIC17.56■□□□□ 0.4
SLC28A1O00337 AC007663.1-201ENST00000438948 1240 ntBASIC17.56■□□□□ 0.4
SLC28A1O00337 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC28A1O00337 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SLC28A1O00337 C2orf69P3-201ENST00000565542 1120 ntBASIC17.56■□□□□ 0.4
SLC28A1O00337 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.56■□□□□ 0.4
SLC28A1O00337 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC28A1O00337 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC28A1O00337 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC28A1O00337 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC28A1O00337 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC28A1O00337 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC28A1O00337 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC28A1O00337 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC28A1O00337 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC28A1O00337 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SLC28A1O00337 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC28A1O00337 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC28A1O00337 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.55■□□□□ 0.4
SLC28A1O00337 PKD1P1-201ENST00000458669 6805 ntBASIC17.55■□□□□ 0.4
SLC28A1O00337 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC28A1O00337 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SLC28A1O00337 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC28A1O00337 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC28A1O00337 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.55■□□□□ 0.4
SLC28A1O00337 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC28A1O00337 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC28A1O00337 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC28A1O00337 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC28A1O00337 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.55■□□□□ 0.4
SLC28A1O00337 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC28A1O00337 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.55■□□□□ 0.4
SLC28A1O00337 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC28A1O00337 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC28A1O00337 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC28A1O00337 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC28A1O00337 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.55■□□□□ 0.4
SLC28A1O00337 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
SLC28A1O00337 AC010653.2-201ENST00000623505 997 ntBASIC17.55■□□□□ 0.4
SLC28A1O00337 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SLC28A1O00337 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SLC28A1O00337 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC28A1O00337 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC28A1O00337 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC28A1O00337 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC28A1O00337 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SLC28A1O00337 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC28A1O00337 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC28A1O00337 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SLC28A1O00337 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC28A1O00337 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC28A1O00337 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SLC28A1O00337 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SLC28A1O00337 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC28A1O00337 LINC01126-201ENST00000623515 1646 ntBASIC17.54■□□□□ 0.4
SLC28A1O00337 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.54■□□□□ 0.4
SLC28A1O00337 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
SLC28A1O00337 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
SLC28A1O00337 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SLC28A1O00337 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC28A1O00337 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SLC28A1O00337 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC28A1O00337 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC28A1O00337 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC28A1O00337 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC28A1O00337 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC28A1O00337 MIR1238-201ENST00000408483 83 ntBASIC17.54■□□□□ 0.4
SLC28A1O00337 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms