Protein–RNA interactions for Protein: A0A1B0GVG4

CCDC194, Coiled-coil domain-containing protein 194, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC194A0A1B0GVG4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC194A0A1B0GVG4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC194A0A1B0GVG4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC194A0A1B0GVG4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.84■□□□□ 0.93
CCDC194A0A1B0GVG4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC194A0A1B0GVG4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.84■□□□□ 0.93
CCDC194A0A1B0GVG4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC194A0A1B0GVG4 AL671277.2-201ENST00000458060 996 ntBASIC20.84■□□□□ 0.93
CCDC194A0A1B0GVG4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.84■□□□□ 0.93
CCDC194A0A1B0GVG4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.84■□□□□ 0.93
CCDC194A0A1B0GVG4 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.84■□□□□ 0.93
CCDC194A0A1B0GVG4 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.84■□□□□ 0.93
CCDC194A0A1B0GVG4 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC194A0A1B0GVG4 AC024563.2-201ENST00000603282 481 ntBASIC20.84■□□□□ 0.93
CCDC194A0A1B0GVG4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.84■□□□□ 0.93
CCDC194A0A1B0GVG4 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC194A0A1B0GVG4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC194A0A1B0GVG4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CCDC194A0A1B0GVG4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC194A0A1B0GVG4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC194A0A1B0GVG4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC194A0A1B0GVG4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC194A0A1B0GVG4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC194A0A1B0GVG4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC194A0A1B0GVG4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC194A0A1B0GVG4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC194A0A1B0GVG4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
CCDC194A0A1B0GVG4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.83■□□□□ 0.93
CCDC194A0A1B0GVG4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC194A0A1B0GVG4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC194A0A1B0GVG4 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC194A0A1B0GVG4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
CCDC194A0A1B0GVG4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC194A0A1B0GVG4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.83■□□□□ 0.92
CCDC194A0A1B0GVG4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.83■□□□□ 0.92
CCDC194A0A1B0GVG4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC194A0A1B0GVG4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC194A0A1B0GVG4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC194A0A1B0GVG4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.83■□□□□ 0.92
CCDC194A0A1B0GVG4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC194A0A1B0GVG4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC194A0A1B0GVG4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC194A0A1B0GVG4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC194A0A1B0GVG4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC194A0A1B0GVG4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC194A0A1B0GVG4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC194A0A1B0GVG4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC194A0A1B0GVG4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC194A0A1B0GVG4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC194A0A1B0GVG4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CCDC194A0A1B0GVG4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC194A0A1B0GVG4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.82■□□□□ 0.92
CCDC194A0A1B0GVG4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.82■□□□□ 0.92
CCDC194A0A1B0GVG4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.82■□□□□ 0.92
CCDC194A0A1B0GVG4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CCDC194A0A1B0GVG4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.82■□□□□ 0.92
CCDC194A0A1B0GVG4 NTF6B-201ENST00000591913 560 ntBASIC20.82■□□□□ 0.92
CCDC194A0A1B0GVG4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
CCDC194A0A1B0GVG4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CCDC194A0A1B0GVG4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CCDC194A0A1B0GVG4 AL096828.2-201ENST00000567259 1965 ntBASIC20.82■□□□□ 0.92
CCDC194A0A1B0GVG4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CCDC194A0A1B0GVG4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC194A0A1B0GVG4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC194A0A1B0GVG4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC194A0A1B0GVG4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC194A0A1B0GVG4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC194A0A1B0GVG4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CCDC194A0A1B0GVG4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 AL390961.4-201ENST00000623958 2535 ntBASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 AC083849.1-201ENST00000615227 514 ntBASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 AL590326.2-201ENST00000625139 305 ntBASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 REXO1L9P-201ENST00000604264 2108 ntBASIC20.81■□□□□ 0.92
CCDC194A0A1B0GVG4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms