Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC4Q9Y5F7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC4Q9Y5F7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC4Q9Y5F7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC4Q9Y5F7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGC4Q9Y5F7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC4Q9Y5F7 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.41■□□□□ 0.54
PCDHGC4Q9Y5F7 PCED1CP-201ENST00000419887 785 ntBASIC18.41■□□□□ 0.54
PCDHGC4Q9Y5F7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGC4Q9Y5F7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.41■□□□□ 0.54
PCDHGC4Q9Y5F7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.41■□□□□ 0.54
PCDHGC4Q9Y5F7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGC4Q9Y5F7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.41■□□□□ 0.54
PCDHGC4Q9Y5F7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGC4Q9Y5F7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC4Q9Y5F7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PCDHGC4Q9Y5F7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHGC4Q9Y5F7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
PCDHGC4Q9Y5F7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGC4Q9Y5F7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHGC4Q9Y5F7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC4Q9Y5F7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC4Q9Y5F7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC4Q9Y5F7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC4Q9Y5F7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHGC4Q9Y5F7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGC4Q9Y5F7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGC4Q9Y5F7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGC4Q9Y5F7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PCDHGC4Q9Y5F7 PHGDH-209ENST00000641074 1780 ntBASIC18.4■□□□□ 0.54
PCDHGC4Q9Y5F7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGC4Q9Y5F7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGC4Q9Y5F7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGC4Q9Y5F7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHGC4Q9Y5F7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHGC4Q9Y5F7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
PCDHGC4Q9Y5F7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHGC4Q9Y5F7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGC4Q9Y5F7 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
PCDHGC4Q9Y5F7 AP003733.1-201ENST00000491725 852 ntBASIC18.4■□□□□ 0.54
PCDHGC4Q9Y5F7 RNF126P1-202ENST00000569893 925 ntBASIC18.4■□□□□ 0.54
PCDHGC4Q9Y5F7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
PCDHGC4Q9Y5F7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
PCDHGC4Q9Y5F7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGC4Q9Y5F7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGC4Q9Y5F7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGC4Q9Y5F7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGC4Q9Y5F7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHGC4Q9Y5F7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGC4Q9Y5F7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHGC4Q9Y5F7 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.4■□□□□ 0.54
PCDHGC4Q9Y5F7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGC4Q9Y5F7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
PCDHGC4Q9Y5F7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PCDHGC4Q9Y5F7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
PCDHGC4Q9Y5F7 AC093677.2-201ENST00000600169 1863 ntBASIC18.39■□□□□ 0.54
PCDHGC4Q9Y5F7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PCDHGC4Q9Y5F7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGC4Q9Y5F7 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGC4Q9Y5F7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PCDHGC4Q9Y5F7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHGC4Q9Y5F7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGC4Q9Y5F7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
PCDHGC4Q9Y5F7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PCDHGC4Q9Y5F7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGC4Q9Y5F7 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHGC4Q9Y5F7 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHGC4Q9Y5F7 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHGC4Q9Y5F7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHGC4Q9Y5F7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHGC4Q9Y5F7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.39■□□□□ 0.53
PCDHGC4Q9Y5F7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGC4Q9Y5F7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHGC4Q9Y5F7 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHGC4Q9Y5F7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHGC4Q9Y5F7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGC4Q9Y5F7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGC4Q9Y5F7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGC4Q9Y5F7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PCDHGC4Q9Y5F7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PCDHGC4Q9Y5F7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGC4Q9Y5F7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGC4Q9Y5F7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGC4Q9Y5F7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC4Q9Y5F7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHGC4Q9Y5F7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC4Q9Y5F7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
PCDHGC4Q9Y5F7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC4Q9Y5F7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC4Q9Y5F7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC4Q9Y5F7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC4Q9Y5F7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC4Q9Y5F7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC4Q9Y5F7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDHGC4Q9Y5F7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC4Q9Y5F7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC4Q9Y5F7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDHGC4Q9Y5F7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC4Q9Y5F7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDHGC4Q9Y5F7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms