Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GAFA1Q96PS6 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.17■□□□□ 0.02
GAFA1Q96PS6 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GAFA1Q96PS6 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GAFA1Q96PS6 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.17■□□□□ 0.02
GAFA1Q96PS6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.17■□□□□ 0.02
GAFA1Q96PS6 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
GAFA1Q96PS6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
GAFA1Q96PS6 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GAFA1Q96PS6 AC093010.1-201ENST00000473625 1624 ntBASIC15.17■□□□□ 0.02
GAFA1Q96PS6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GAFA1Q96PS6 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GAFA1Q96PS6 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GAFA1Q96PS6 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
GAFA1Q96PS6 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
GAFA1Q96PS6 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GAFA1Q96PS6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
GAFA1Q96PS6 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GAFA1Q96PS6 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
GAFA1Q96PS6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GAFA1Q96PS6 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GAFA1Q96PS6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
GAFA1Q96PS6 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.16■□□□□ 0.02
GAFA1Q96PS6 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.16■□□□□ 0.02
GAFA1Q96PS6 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.16■□□□□ 0.02
GAFA1Q96PS6 MIR1224-201ENST00000408193 85 ntBASIC15.16■□□□□ 0.02
GAFA1Q96PS6 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.16■□□□□ 0.02
GAFA1Q96PS6 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.16■□□□□ 0.02
GAFA1Q96PS6 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.16■□□□□ 0.02
GAFA1Q96PS6 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.16■□□□□ 0.02
GAFA1Q96PS6 AC010331.1-201ENST00000611423 582 ntBASIC15.16■□□□□ 0.02
GAFA1Q96PS6 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.16■□□□□ 0.02
GAFA1Q96PS6 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GAFA1Q96PS6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GAFA1Q96PS6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GAFA1Q96PS6 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GAFA1Q96PS6 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.16■□□□□ 0.02
GAFA1Q96PS6 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GAFA1Q96PS6 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
GAFA1Q96PS6 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GAFA1Q96PS6 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GAFA1Q96PS6 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GAFA1Q96PS6 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GAFA1Q96PS6 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GAFA1Q96PS6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
GAFA1Q96PS6 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.16■□□□□ 0.02
GAFA1Q96PS6 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GAFA1Q96PS6 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
GAFA1Q96PS6 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.15■□□□□ 0.02
GAFA1Q96PS6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.15■□□□□ 0.02
GAFA1Q96PS6 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GAFA1Q96PS6 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GAFA1Q96PS6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
GAFA1Q96PS6 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
GAFA1Q96PS6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GAFA1Q96PS6 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GAFA1Q96PS6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GAFA1Q96PS6 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
GAFA1Q96PS6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GAFA1Q96PS6 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GAFA1Q96PS6 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GAFA1Q96PS6 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GAFA1Q96PS6 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
GAFA1Q96PS6 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GAFA1Q96PS6 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.15■□□□□ 0.02
GAFA1Q96PS6 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
GAFA1Q96PS6 AP003733.1-201ENST00000491725 852 ntBASIC15.15■□□□□ 0.02
GAFA1Q96PS6 AC113404.2-201ENST00000507884 177 ntBASIC15.15■□□□□ 0.02
GAFA1Q96PS6 AC087388.1-201ENST00000571370 1112 ntBASIC15.15■□□□□ 0.02
GAFA1Q96PS6 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.15■□□□□ 0.02
GAFA1Q96PS6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
GAFA1Q96PS6 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.15■□□□□ 0.02
GAFA1Q96PS6 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
GAFA1Q96PS6 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GAFA1Q96PS6 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
GAFA1Q96PS6 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GAFA1Q96PS6 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
GAFA1Q96PS6 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
GAFA1Q96PS6 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
GAFA1Q96PS6 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15.15■□□□□ 0.02
GAFA1Q96PS6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
GAFA1Q96PS6 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GAFA1Q96PS6 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.15■□□□□ 0.02
GAFA1Q96PS6 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GAFA1Q96PS6 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
GAFA1Q96PS6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.14■□□□□ 0.01
GAFA1Q96PS6 REXO1L9P-201ENST00000604264 2108 ntBASIC15.14■□□□□ 0.01
GAFA1Q96PS6 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GAFA1Q96PS6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GAFA1Q96PS6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.14■□□□□ 0.01
GAFA1Q96PS6 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.14■□□□□ 0.01
GAFA1Q96PS6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.14■□□□□ 0.01
GAFA1Q96PS6 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GAFA1Q96PS6 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GAFA1Q96PS6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.14■□□□□ 0.01
GAFA1Q96PS6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.14■□□□□ 0.01
GAFA1Q96PS6 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GAFA1Q96PS6 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GAFA1Q96PS6 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GAFA1Q96PS6 AL645929.1-201ENST00000420084 975 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms